Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00696 ATGTCTATCAGTGACTACCCCGCCGTCGATTACGTTCACCAGCGCGGCGGGGGCGGCAACGGTACAGCTACTACCGATCACCATCGCCTCTCGTCCAAGCGAAAATTAGATGACTATGGTCCGAGCTTAGACGATGACGAGGAGTACGAGGATTTTTCTGAATTAGTATCGGTCAGAATGAGGAAAGACGAACCCAAAGCGGTCAATTCCTCCTCCGATGTTATCTCTCACAACATCAATGGTTCTTTGTCAGACATCGATACTAGACACTCCGACGCGCGATCGGCTTGCTCGTCGCAGTCCGAGTCGACTCGTTCATCCTTCAGGTTACAGTTTTTTGTTAGAATGATGTCCGAGGGAAATACTATGGTAATGCAAGCTTGCCCGCAAGACACTGTGAAATCTATTCACGAGCGTATCCAAACAATGAAGGGTATCCCTCTATTTGAGCAGAGACTCATATACAGAGGTAAGCAGCTTCAGTGGGAGCAGTCTCTCGCAGAGTGTGACATTCAAAATGACGCCAATCTTCAATTGGTTGGTCGGATGCGAAGCACTGAGCACCCTCAAGCTTGGCAAGTGATAAACGACATGGTGTCACTCATTTGCCGCCTGTGCAGAGGGGAAGTGGAACATGATGCCTTGAAAACTATCAAGGGACTCATGACTAGCTACCTAAATATGACTCCCAGACTCGACAATGATTCTGCTTCTGGGTATTTTCAGATTTTCATGTCTTCATCCGCTCCAAAAGTGCTGATCATGCTCTATATGTCGCCTTATAGAGGTAACAAAGACTGTGCTGACTGTTCTATTAGGCATTTTTTGAGTTCATGTCGCACTACCTTGTCTAAATCGTTGCATAATCAGTGTGCTCGTGTAGTATTGAAATTCTGTAAATTGCTTAGAAGAGTGAGTTGTGAGGATCCTTTATATCTCTCTTGTCGGAGTACATTTGGGTCTTTATTAGAGACAGCTGGCGTTTCCTATGGTTCCGATTGTAGTAAAGGGATGATTCTCATTCAGGAGATTTCACCATTTGTTCGAGAGCTGGCAAATAGGTTGTTGAAGGATTTGGATTATAGTATGGAATCCCCATCTAGCGTGGGGCCATTGTTGAGTGATGTTCGTGATTTTATAGCTTTCATACTCCCTTTAAGGACTGGAATCAAGGAGCAACAGGCTTGCAAAGGTTCTTCCTTACCTGATGAAAAACGCCATAAGCATCTCATACCTGCAGAGGAGATTGAATACCTTCATCTTATGTTTATCGAgttgttgaagaaaatggaTCATTGCCTTCAAAAGATGGAGGAATCCTGGGCTGCCAAGGAAAGAGGGGAAGATGATATGCTTTACTCCGCATGGTCGCATTATCTTTCCATCTTGAAAGAATTGTATCACATTTCTAAGCTCTATGAAGGCGcggaagaagaattttggtCAGTTTTGAGGCGTCAAAGAAGTATGATCTGTGTACTAATTATTCGATATGCAAAAAGAACAGATGATCATCAGTGGATTCTCGAGCACAAGAGTGTGACAAATTTTGAATCTAGGAGGCATTTGGCAATGATGATGTTCCCTGAAGTAAAAGAAGACTATGAGGAGCTGCATGAGATGCTTATTGACAGGTCTCAATTGTTGGCAGAATCCTTTGAGTACATAGCACGAGCAGAACCTGAATCTCTGCATGCAGGTCTTTTCATGGaattcaaaaatgaagaagctaCAGGTCCAGGGGTACTGCGGGAGTGGTTTCTCTTGGTATGCCAAGCAATATTTAATCCCCAAAATGCTCTTTTTGTGGCATGCCCAAATGACCGTAGAAGATTTTTCCCCAATCCTGCATCTAAGGTAGATCCTTTGCACCTTGAATACTTCAGTTTCTCCGGTCGGGTTATTGCATTAGCTTTGATGCATAAGGTGCAAGTTGGTATTGTTCTTGATCGTATGTTTTTCTCACAATTGGCTGGAAGCTATATTACTTTAGAGGATATACGGGATGCTGATCCTTGCTTGTATAGTAGCTGCAAGCAGATATTGGAAATGGATGCTGATTTTATTGACTCAGATGCTTTAGGACTGACATTTGTTAGAGAGGTGGAGGAGTTAGGACACAGGAAAGTGGTCGAGCTTTGCCCTGGAGGGAAAAACCTTGTTGTTAACAGTAAGAACAGGGAGAAGTATGTTGATCTTCTTGTACAAGATCGTTTTGTAACATCTATCTCTGAGCAGGTGTCACATTTTTCTCAAGGCTTTGCTGATATTCTAAGCAACTCAAGGCTCCAAAAGTTCTTCTTTAAAAGTTTAGAGCTTGAGGATCTTGATTGGATGCTGCATGGGAgtgaaaatatcatttctGTTGAAGATTGGAAGGCGCATACAGAGTATAATGGCTATAAAGAGACGGATATACAGATTTCTTGGTTTTGGGAGaTTGTTGGGAGAATGTCAATTGAACAAAGGAAGattcttctgtttttctgGACGTCTGTGAAGTATTTGCCTATGGAAGGTTTTCGTGGTTTGGCTTCTCATCTTTATATTTACAAGTCCCCAGAACCCGATGATCGTCTTCCTTCATCTCACACTTGCTTTTACCGGATCTGTTTTCCACCATATTCCTCGATGGCTGTCATGGAGGATCGTCTTAGAATCATCACTCAAGAACACATTGGCTGCAGCTTCGGTACTTGGTG 2702 0.4201 MSISDYPAVDYVHQRGGGGNGTATTDHHRLSSKRKLDDYGPSLDDDEEYEDFSELVSVRMRKDEPKAVNSSSDVISHNINGSLSDIDTRHSDARSACSSQSESTRSSFRLQFFVRMMSEGNTMVMQACPQDTVKSIHERIQTMKGIPLFEQRLIYRGKQLQWEQSLAECDIQNDANLQLVGRMRSTEHPQAWQVINDMVSLICRLCRGEVEHDALKTIKGLMTSYLNMTPRLDNDSASGYFQIFMSSSAPKVLIMLYMSPYRGNKDCADCSIRHFLSSCRTTLSKSLHNQCARVVLKFCKLLRRVSCEDPLYLSCRSTFGSLLETAGVSYGSDCSKGMILIQEISPFVRELANRLLKDLDYSMESPSSVGPLLSDVRDFIAFILPLRTGIKEQQACKGSSLPDEKRHKHLIPAEEIEYLHLMFIELLKKMDHCLQKMEESWAAKERGEDDMLYSAWSHYLSILKELYHISKLYEGAEEEFWSVLRRQRSMICVLIIRYAKRTDDHQWILEHKSVTNFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLAESFEYIARAEPESLHAGLFMEFKNEEATGPGVLREWFLLVCQAIFNPQNALFVACPNDRRRFFPNPASKVDPLHLEYFSFSGRVIALALMHKVQVGIVLDRMFFSQLAGSYITLEDIRDADPCLYSSCKQILEMDADFIDSDALGLTFVREVEELGHRKVVELCPGGKNLVVNSKNREKYVDLLVQDRFVTSISEQVSHFSQGFADILSNSRLQKFFFKSLELEDLDWMLHGSENIISVEDWKAHTEYNGYKETDIQISWFWEIVGRMSIEQRKILLFFWTSVKYLPMEGFRGLASHLYIYKSPEPDDRLPSSHTCFYRICFPPYSSMAVMEDRLRIITQEHIGCSFGTW 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00696 900 SMART hect_3 558 898 IPR000569 GO:0004842
Bva14g00696 900 Gene3D Hect, E3 ligase catalytic domain 783 899 - -
Bva14g00696 900 MobiDBLite consensus disorder prediction 1 47 - -
Bva14g00696 900 Pfam HECT-domain (ubiquitin-transferase) 589 892 IPR000569 GO:0004842
Bva14g00696 900 Gene3D Hect, E3 ligase catalytic domains 540 773 - -
Bva14g00696 900 PRINTS Ubiquitin signature 121 141 IPR019956 -
Bva14g00696 900 PRINTS Ubiquitin signature 163 184 IPR019956 -
Bva14g00696 900 PRINTS Ubiquitin signature 142 162 IPR019956 -
Bva14g00696 900 CDD HECTc 539 898 IPR000569 GO:0004842
Bva14g00696 900 SUPERFAMILY Hect, E3 ligase catalytic domain 535 887 IPR035983 GO:0004842
Bva14g00696 900 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL5 91 898 - -
Bva14g00696 900 ProSiteProfiles Ubiquitin domain profile. 110 186 IPR000626 GO:0005515
Bva14g00696 900 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 91 898 - -
Bva14g00696 900 ProSiteProfiles HECT domain profile. 560 900 IPR000569 GO:0004842
Bva14g00696 900 Pfam Ubiquitin family 113 184 IPR000626 GO:0005515
Bva14g00696 900 SMART ubq_7 110 182 IPR000626 GO:0005515
Bva14g00696 900 MobiDBLite consensus disorder prediction 27 41 - -
Bva14g00696 900 Gene3D Hect, E3 ligase catalytic domain 660 742 - -
Bva14g00696 900 SUPERFAMILY Ubiquitin-like 111 198 IPR029071 -
Bva14g00696 900 Gene3D - 103 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00696 Bva-Chr14 3227282 3229162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00696 110 184 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 38.667 1.98e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00696 - - gmx:100789233 1384.01