Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00666 ATGAAACTTGATAGCTCCAACGGAGAGATGCGTACTGCTAACGAAGTTTCACCGCCCTTGACCGGTGATATTTCGCTGAAGCGGAAGCGTCCGGCGAACGGAGACAATACCGAGAGGGACGGGGAGGAGATATTTGTGCCTCCGCTGAATTTCGCCATGGTTGATAATGGTATTTTTCGGTCTGGTTTTCCTGATTCTGCCAACTTCGGATTCCTGAAATCCCTTCGTCTCCGTTCCATTATCTGTTTGTGTCCTGAACCGTATCCGGAAGCGAATTCAGAATTTTTGAAGGCTAATGGGATTGAGCTTTATCAATTTGGGATCGAGAGCTGTAAGGAACCTTTTGTTAACATTCCAGAGGATACAGTTCGTGAAGCAATGAAAGTTCTCCTCGATACGAAGAACCATCCACTGCTAATTCACTGCAAACGAGGAAAGCACCGCACCGGTTGTCTTGTGGGATGCTTGAGAAGGTTGCAGAGATGGTGTTTATCGTCTGTCTTCGACGAGTATCAAAGGTTTGCTGCTGCCAAAGCCAGAGTGTCAGATCAGAGGTTCATAGAATTGTTTGATATTTCTAGTTTGAAGCATTATCCGATGTCATTTTCATGTTCAAGGAGATA 623 0.4543 MKLDSSNGEMRTANEVSPPLTGDISLKRKRPANGDNTERDGEEIFVPPLNFAMVDNGIFRSGFPDSANFGFLKSLRLRSIICLCPEPYPEANSEFLKANGIELYQFGIESCKEPFVNIPEDTVREAMKVLLDTKNHPLLIHCKRGKHRTGCLVGCLRRLQRWCLSSVFDEYQRFAAAKARVSDQRFIELFDISSLKHYPMSFSCSRR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00666 207 ProSitePatterns Tyrosine specific protein phosphatases active site. 140 150 IPR016130 GO:0016311|GO:0016791
Bva14g00666 207 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 45 192 IPR029021 -
Bva14g00666 207 PRINTS Plant and fungal dual specificity phosphatase signature 45 62 IPR020428 GO:0016791
Bva14g00666 207 PRINTS Plant and fungal dual specificity phosphatase signature 101 115 IPR020428 GO:0016791
Bva14g00666 207 PRINTS Plant and fungal dual specificity phosphatase signature 82 95 IPR020428 GO:0016791
Bva14g00666 207 PRINTS Plant and fungal dual specificity phosphatase signature 118 132 IPR020428 GO:0016791
Bva14g00666 207 MobiDBLite consensus disorder prediction 1 42 - -
Bva14g00666 207 CDD PFA-DSP_Siw14 45 191 - -
Bva14g00666 207 PANTHER - 1 206 - -
Bva14g00666 207 ProSiteProfiles Dual specificity protein phosphatase domain profile. 50 204 IPR020422 GO:0006470|GO:0008138
Bva14g00666 207 MobiDBLite consensus disorder prediction 28 42 - -
Bva14g00666 207 Pfam Tyrosine phosphatase family 46 197 IPR004861 -
Bva14g00666 207 PANTHER TYROSINE-PROTEIN PHOSPHATASE 1 206 - -
Bva14g00666 207 Gene3D Protein tyrosine phosphatase superfamily 44 194 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00666 Bva-Chr14 3114507 3116143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00666 38 207 Protein tyrosine phosphatase (PTP) family AT4G03960 77.059 3.74e-103 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00666 K18045 - gmx:100785520 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00666 14 3114507 3116143 Bva14g00666 14 3114507 3116143 ECH