Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00665 ATGGGGAAATCTgggggaagaaaaaagaagggtgGTTCAAACCAAGTTGCCGTTGATAATTCAGCTCCAATTGCTAATGGTGGTGTGGACTTAgactcttctctctttttgaaAAGAGCCCATGAGCTCAAAGAAGAAGGGAATAGGAGGTTTCAGAATAAGGACTATGCAGGTGCCCTTGAACAATATGACAATGCTCTTCGACTAACCCCAAAGACCCACCCTGATAGAGCGGTTTTTCACAGCAATAGAGCTGCATGTTTGATGCAAATGAAGCCCATTGATTATGAAACTGTCATTGCTGAATGCACCATGGCACTTCAGGTCCAGCCCCGATTTGTGCGGGCTCTTCTTAGGAGGGCTAGGGCATTTGAGGCTATAGGGAAATATGAAATGGCTATGCAAGATGTGCAAGTCTTATTGGGAGCTGACCCTAACCACCGGGATGCATTGGAGATTGCCCAAAGATTGAGGACAGCATTGGGACCTCGTCAGGAGGCCCAACAGGATCTTCAGAGTCGCCCCTCCCCTGCTGCACTTGGTGCCTCTGCAGTTCGTGGTGCTCCTATTGCTGGTTTAGGGCCTTGTTTACCAGCCCGTCCAGTACCAAAGAAGGCAGCAAATTCAGCTGTTGGATCAGTTGCCTCACTTAACAGTAAGCCAGAGAAGTCCCATTCAGTTGTACCTACTGAAAATGGTCCTCAGACTAAGTCCCAATATCCAAAACTTGTGTTGAAGCCATCAAACGGTTCTTCTAAATCATCGAACTCAAGGAAAGAGAACCAGAATGAGCAGTCTTCTCATTCAACTGTTCATGGACAGATTTCTGAGGTTCCAATTCGGTGGAGACCATTGAAACTTTTTTATGATCATGATATCAGGCTTGGGCAGATGCCAATCAATTGCAGTTTCAGACTACTAAGAGATATAGTCAGTAAAAGATTTCCATCCTCAAAGTCAGTTCTGATCAAGTATAAGGATGTTGATGGTGATTTGGTCACTATAACCTCCACTGATGAACTCAGATTAGCAGAGTCTAGTGTTGATAGCCATCTTGTAAAAGAACCTGAAGCTGATAAAAGTGATTCAGTGGGGATGTTGAGATTACATATTGTTGAAGTTAGTCCTGAACAGGAGCCACCTTTGttggaagaagaggaagaaaaacctGTTGAGAGTGAAGGGATCAAGGGAGATGAGAGTCAGTCTCATTCTTCTGTCAGTGAATCTGTCTTAGAAACTCTTGATACGGAGGTTGATAAGGTTGGGAAAGAAATTCCAAAGGAAAAACCAGGAGCTGCAGAAGATACTGAGTGCAAGGAAGTGGAGATGGATGACTGGTTGTTTGAGTTTGCTCAGCTTTTCCGCTCACATGTTGGTATTGATCCAGATGCTCACATTGATTTGCATGAGCTTGGCATGGAGCTTTGTGCAGAAGCACTTGAGGAAACAGTGACTAGTGAGGAGGCTCAAGGTCTCTTTGATAAAGCTGCCTCAAAGTTCCAGGAGGTGGCAGCATTAGCTTTCTTCAACTGGGGAAATGTCCATATGTGTGCAGCTAGAAAACGAATCCCCTTGGATGAGACGGCTGGGAAGGAGGTAGTGGCAGAACAGCTCCAAGTTGCTTATGACTgggttaaagaaaaatattctttggCTAAGAAAAAGTATGAGGAAGCACTCATTATCAAACCAGACTTTTATGAGGGATTATTGGCTCTGGGGCAGCAACAATTTGAATTGGCCAAACTTCATTGGTCATTTGCACTCGCAAAGAAGATTGATCTTTCTGACTGGGATTCTGCAGAGACACTCCAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGCTGCCACTGATATGTGGGAGAAGCTGGAGGAACAGAGAGCTAGAGAGTCGAAGGACCCCAATGCaagcaagaaagaagaactattgagaagaagaaagaaacaaggaGCTGCAAGTGAGGGCGAGTCCTCCAGTGTTATCGGTCAAGGTGAGATTTCTGCTGATGAAGCTGCGGAGCAAGCAGCTGTCATGAGATCCCAGATTCACCTCTTCTGGGGTAATATGCTTTTTGAACGATCCCAAGTTGAATGCAAATTAGGGATAGATGGTTGGAATAAAAACCTGGATGCTGCTATTGAGCGTTTTAAGCTCGCTGGAGCTTCTGAGGCTGACATCTCAATGGTTATAAAGAACCATTGCTCCAACGCAGATGCAAAGGAAGGAGATAATAAAAAGATTCAAATACAGTCCAATTA 2264 0.4236 MGKSGGRKKKGGSNQVAVDNSAPIANGGVDLDSSLFLKRAHELKEEGNRRFQNKDYAGALEQYDNALRLTPKTHPDRAVFHSNRAACLMQMKPIDYETVIAECTMALQVQPRFVRALLRRARAFEAIGKYEMAMQDVQVLLGADPNHRDALEIAQRLRTALGPRQEAQQDLQSRPSPAALGASAVRGAPIAGLGPCLPARPVPKKAANSAVGSVASLNSKPEKSHSVVPTENGPQTKSQYPKLVLKPSNGSSKSSNSRKENQNEQSSHSTVHGQISEVPIRWRPLKLFYDHDIRLGQMPINCSFRLLRDIVSKRFPSSKSVLIKYKDVDGDLVTITSTDELRLAESSVDSHLVKEPEADKSDSVGMLRLHIVEVSPEQEPPLLEEEEEKPVESEGIKGDESQSHSSVSESVLETLDTEVDKVGKEIPKEKPGAAEDTECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCAEALEETVTSEEAQGLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDETAGKEVVAEQLQVAYDWVKEKYSLAKKKYEEALIIKPDFYEGLLALGQQQFELAKLHWSFALAKKIDLSDWDSAETLQLFDSAEEKMKAATDMWEKLEEQRARESKDPNASKKEELLRRRKKQGAASEGESSSVIGQGEISADEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGIDGWNKNLDAAIERFKLAGASEADISMVIKNHCSNADAKEGDNKKIQIQSN 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00665 754 Coils Coil 608 628 - -
Bva14g00665 754 SUPERFAMILY TPR-like 37 171 IPR011990 GO:0005515
Bva14g00665 754 MobiDBLite consensus disorder prediction 375 411 - -
Bva14g00665 754 SMART PB1_new 282 374 IPR000270 GO:0005515
Bva14g00665 754 CDD PB1 285 344 - -
Bva14g00665 754 PANTHER - 1 749 - -
Bva14g00665 754 SUPERFAMILY TPR-like 488 584 IPR011990 GO:0005515
Bva14g00665 754 ProSiteProfiles PB1 domain profile. 282 374 IPR000270 GO:0005515
Bva14g00665 754 Gene3D Tetratricopeptide repeat domain 37 169 IPR011990 GO:0005515
Bva14g00665 754 PANTHER PROTEIN CLMP1 1 749 IPR044517 -
Bva14g00665 754 MobiDBLite consensus disorder prediction 213 275 - -
Bva14g00665 754 MobiDBLite consensus disorder prediction 1 23 - -
Bva14g00665 754 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Bva14g00665 754 Pfam PB1 domain 282 373 IPR000270 GO:0005515
Bva14g00665 754 Gene3D - 284 354 - -
Bva14g00665 754 MobiDBLite consensus disorder prediction 626 667 - -
Bva14g00665 754 SUPERFAMILY CAD & PB1 domains 280 352 - -
Bva14g00665 754 SMART tpr_5 78 113 IPR019734 GO:0005515
Bva14g00665 754 SMART tpr_5 40 73 IPR019734 GO:0005515
Bva14g00665 754 SMART tpr_5 114 147 IPR019734 GO:0005515
Bva14g00665 754 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Bva14g00665 754 MobiDBLite consensus disorder prediction 213 274 - -
Bva14g00665 754 MobiDBLite consensus disorder prediction 626 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00665 Bva-Chr14 3110477 3113441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00665 30 161 Calmodulin-binding Proteins AT3G25230 27.273 4.87e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00665 - - gmx:100786963 1188.33