Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00663 ATGAGTCAACTCGGTGTGATATTGCAGGAATCGCTTCCCAGAGAAAGGGAAGCAAGAACGATACTGGGTTTGTTAACGGAGCAAATGGAAGGTGTGGTCGATAGAGAGCCAAGGAGGAGGAGAACTCTGAAAGAACGGCTCCGATTGAACGGGCTCGGATGTTGTGGGGCCACCTGGGGTTTCCGACCCGCGACTATAAGGGTGAGACACGAAGAAGAGGAAGGACAACGACAAGAACAGCAACCGCTACAGCACACGAATCCGGGTCATGCTTCGAACTCGTCGGACCCCGAGTGTGCTGGTCCCACACCGGCTTCAAATATGAATCTTGCAGCGGCATTGGCCGCGGAGCGTCAATACCGGGGATCGCAGGAACCGGATGGAGGTACCCGTACCGTGGGATCCATCCTTAACGGTTTAGGGGGTGGAGGGGGAGGCACGGGGCCGGGGACGCCGTGGAGGGTATCGTTGATGAGGCTGCTGGAAGAAACAGAGGGCGGAGATACGGCGGAGGTAACGGGAAAGGAGAAAGTAGGGCCACCGGGGAATGATTCGTTGTGCTGCGTGTGCATGGGAAGGAGTAAAGGTGCAGCGTTCATTCCATGTGGGCACACTTTTTGCAGGGTGTGTTCGAGGGAGCTGTGGTTGAACCGAGGGTCTTGTCCCCTCTGCAATCGCTCAATCCTCGAGATTCTTGATATATTCTG 707 0.5587 MSQLGVILQESLPREREARTILGLLTEQMEGVVDREPRRRRTLKERLRLNGLGCCGATWGFRPATIRVRHEEEEGQRQEQQPLQHTNPGHASNSSDPECAGPTPASNMNLAAALAAERQYRGSQEPDGGTRTVGSILNGLGGGGGGTGPGTPWRVSLMRLLEETEGGDTAEVTGKEKVGPPGNDSLCCVCMGRSKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00663 235 SUPERFAMILY RING/U-box 183 232 - -
Bva14g00663 235 MobiDBLite consensus disorder prediction 118 149 - -
Bva14g00663 235 MobiDBLite consensus disorder prediction 80 102 - -
Bva14g00663 235 SMART ring_2 187 224 IPR001841 -
Bva14g00663 235 PANTHER OS01G0917900 PROTEIN 17 235 - -
Bva14g00663 235 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 235 - -
Bva14g00663 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 234 IPR013083 -
Bva14g00663 235 MobiDBLite consensus disorder prediction 70 106 - -
Bva14g00663 235 Pfam Zinc finger, C3HC4 type (RING finger) 184 229 - -
Bva14g00663 235 ProSiteProfiles Zinc finger RING-type profile. 187 225 IPR001841 -
Bva14g00663 235 CDD RING-HC 187 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00663 Bva-Chr14 3095774 3097163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00663 21 235 C3H Transcription Factor Family AT4G22250 48.649 4.16e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00663 - - zju:107409202 261.922