Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00627 ATGGACAAGGGATGGGGTCTTACACTGGATAATTCTTCTGGTAATTCTCTCGGTTTCTTTCCATCCAAACAGCCAAGCAGCAGTGCCAATCCCCTCTCCTTCTCCAAGCTCAACCACCAAACCATGTTTCCTCCTGGTTTAGGCTTCCCGGTCAATTTAACTCGCCGCGACGACCACTTGCCGTCCGATGATAATCGCGTGGTCGACTTTTTCTCCGATAGAAATAAGTCTTCATCAACTCCATCTGATCACCATCATCAGCTCAATATTAAGACCGCTTCCGTCAAGAAGGAAAATTCTCACCCGGAACCTCCTCGCAAGTCTAATCTAGATTTGAATaCGGGTTTACAGCTCCTCACGGCTAACACTAGGAGCGATCAATCGACGGTGGATGATGGGGTTTCATCAGATGCCGAAGACAAGCGAGTGgttgCGGAATTGCAAGACGAGCTTCAACGGATGAACacagaaaaccaaaaactGAAGGATATGCTGAGCCACGTGAGCAGCAACTACACCACCTTGCAAATACATCTGGTCTCGTTGATGCAACAGCAACAGAACCAACGCCCCGAGAGCAAGGAACAGGagGTTGTGGAAGTAAAAAGTGAGGAGAAAAATCATGGGGTGGTACCAAGGCAGTTTCTTGATTTAAAACCGAGTGGCACAGCTGAAGCAGATGAAGATCAAGTGTCCAATTCTTCATCGGACGAAAGAACTCGATCTAGTACGCCTCAGAACAAGAACAATAATggcaaaaatgaaattacaagGGAAGAGAGTCCAGACACTGAAACCCAAGCTTGGGCTCCTAATAATAAGCTTCAGAAATTGAACCCTTCGAGTACCATCGATCAGTCCAGCCCCGAAGCCACCATGAGAAAAGCTCGTGTCTCCGTTCGCGCTCGATCGGAAGCTCCCATGATCAGCGATGGGTGCCAATGGCGAAAATATGGACAAAAAATGGCTAAGGGAAACCCGTGTCCTCGTGCATATTATAGATGCACCATGGCAGTTGGTTGCCCAGTTCGCAAACAAgTTCAACGTTGTGCCGAGGACAgaacaattttaattacaaCTTATGAAGGAGCGCATAACCATCCATTGCCACCTGCTGCAATGGCCATGGCAAATACTACAACTGCTGCTGCTACCATGTTGCTATCTGGGTCTATGTCCAGTGCTGATGGGCTGATGAACCCCAATTTGCTGGCAAGAGCTATTCTTCCTTGCTCCACAAGCATGGCAACACTTTCGGCTTCCGCGCCATTCCCCACCGTCACATTAGACCTCACGCACAACTCAAACCCAAACCCATTGCAGTTTCAAAGACCTCAAACCCCATTTCAAGTTCCCTTTGCCTCGGGACCCAGCCCAGCAGCATCTCAACTCCCTCAGGTATTTGCACAAGCACTTTATAATCAATCCAAATTCTCCGGCCTTCAGTTATCTCAAGATCATACGGCTTCTTCCCAATTGCCCAACCAAGCTCCAAGGCCAACATTGCAGCCAAACCAGCAGCAGCCCTTGCTGGCTGACACTGTCAGTGCCGCCACCGCAGCAATCACCGCCGACCCTAACTTCACCGCAGTACTTGCCGCCGCCATCTCCTCCATCATCGGCGGTGCTCGtccaaacaacaacaacaacaatagcaGCAGCAATCCCAACATTACCAACAGTACTACAATCAGCAGCTTCTCAGGGAATta 1712 0.472 MDKGWGLTLDNSSGNSLGFFPSKQPSSSANPLSFSKLNHQTMFPPGLGFPVNLTRRDDHLPSDDNRVVDFFSDRNKSSSTPSDHHHQLNIKTASVKKENSHPEPPRKSNLDLNTGLQLLTANTRSDQSTVDDGVSSDAEDKRVVAELQDELQRMNTENQKLKDMLSHVSSNYTTLQIHLVSLMQQQQNQRPESKEQEVVEVKSEEKNHGVVPRQFLDLKPSGTAEADEDQVSNSSSDERTRSSTPQNKNNNGKNEITREESPDTETQAWAPNNKLQKLNPSSTIDQSSPEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGAHNHPLPPAAMAMANTTTAAATMLLSGSMSSADGLMNPNLLARAILPCSTSMATLSASAPFPTVTLDLTHNSNPNPLQFQRPQTPFQVPFASGPSPAASQLPQVFAQALYNQSKFSGLQLSQDHTASSQLPNQAPRPTLQPNQQQPLLADTVSAATAAITADPNFTAVLAAAISSIIGGARPNNNNNNSSSNPNITNSTTISSFSGN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00627 570 ProSiteProfiles WRKY domain profile. 304 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva14g00627 570 MobiDBLite consensus disorder prediction 485 505 - -
Bva14g00627 570 MobiDBLite consensus disorder prediction 184 295 - -
Bva14g00627 570 MobiDBLite consensus disorder prediction 226 252 - -
Bva14g00627 570 MobiDBLite consensus disorder prediction 1 33 - -
Bva14g00627 570 Gene3D WRKY domain 294 371 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva14g00627 570 PANTHER WRKY TRANSCRIPTION FACTOR 31-RELATED 65 557 - -
Bva14g00627 570 MobiDBLite consensus disorder prediction 121 141 - -
Bva14g00627 570 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 65 557 IPR044810 GO:0003700
Bva14g00627 570 MobiDBLite consensus disorder prediction 541 570 - -
Bva14g00627 570 Pfam WRKY DNA -binding domain 311 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva14g00627 570 SMART WRKY_cls 309 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva14g00627 570 Coils Coil 144 171 - -
Bva14g00627 570 MobiDBLite consensus disorder prediction 193 212 - -
Bva14g00627 570 SUPERFAMILY WRKY DNA-binding domain 302 370 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva14g00627 570 MobiDBLite consensus disorder prediction 263 293 - -
Bva14g00627 570 MobiDBLite consensus disorder prediction 8 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00627 Bva-Chr14 2945691 2948103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00627 1 551 WRKY Transcription Factor Family AT1G62300 52.007 8.44e-162 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva14g00627 WRKY 6.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00627 - - ccaj:109803638 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00627 14 2945691 2948103 Bva14g00627 14 2945691 2948103 ECH
Bva14g00627 14 2945691 2948103 Bva13g00528 13 2396866 2399356 ECH
Bva12g02724 12 19885875 19888701 Bva14g00627 14 2945691 2948103 ECH
Bva09g00479 09 2541899 2544505 Bva14g00627 14 2945691 2948103 ECH
Bva07g02164 07 18193687 18196139 Bva14g00627 14 2945691 2948103 ECH