Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00594 ATGTCTTGCTCTAATTTGACAATGTGGGTGTCTTCAAAACCTTCTCTTTTTGATGGATCTTCACTCTCCTTTCGCTCTGCTCTCAACCCTTTTCAACTTCGCACCCAAAATTCATCCTCTTGCAGCCCATCAAGATCATCAGTGACCCAAATTCAGTGTGATCTCCGCGAGCTGAGAGACCGTATTGATTCTGTGAAGAACACCCAGAAGATTACAGAGGCTATGAAGCTTGTGGCTGCTGCGAAAGTCAGAAGAGCACAAGAAGCTGTTGTTAATGGCAGACCGTTCTCAGAGACCCTTGTTGAAGTGCTTTACAACATCAATGAGCAGCTTTCAACTGAAGATATTGATGTTCCTCTGACCAAGGTAAGGCCAGTGAAAAAGGTTGCCCTGGTTGTATGCACAGGAGATCGAGGTCTATGTGGTGGTTTCAATAATGCCATCATAAAGAAAGCTGAGTCGAGAATTGCTGAGTTGAAGGATCTTGGTCTTGATTATACTGTTATTAGTGTTGGTAAGAAGGGTAATTCGTATTTCCTTCGCCGGCCTTACATTCCTGTTGATAGGTTTCTACAAGGTGGTTCTCTTCCCACTGCTAAAGAAGCTCAAGCAATTGCTGATGatgttttctctctctttgtcaGTGAAGAGGTTGACAAAGTGGAGCTCTTATATACCAAATTTGTGTCATTAGTCAAGTCAGATCCAGTAATTCACACCTTGCTTCCACTCTCACCAAAAGGAGAGATCTGTGATGTGAATGGTAATTGTGTGGATGCAGCTGAGGATGAGTTCTTCAGGTTGACAACCAAGGAAGGCAAGCTAACCGTGGAAAGAGATACCGTAAGGACTGAAACAGTAGATTTCTCTCCTATTTTGCAATTTGAGCAGGACCCGGTTCAGATCCTTGATGCCTTGTTGCCTCTTTATCTAAATAGCCAAATCTTGAGGGCGTTGCAGGAGTCACTAGCCAGTGAGCTCGCTGCTAGAATGAGTGCCATGAGCAGTGCAACTGATAATGCAGTGGAATTGAAGAGAACCTTGTCAGTTGTATACAATAGGGAACGTCAAGCTAAAATTACTGGAGAAATTCTTGAAATTGTTGCCGGTGCCAATGCTCTGGTATA 1127 0.4295 MSCSNLTMWVSSKPSLFDGSSLSFRSALNPFQLRTQNSSSCSPSRSSVTQIQCDLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLSTEDIDVPLTKVRPVKKVALVVCTGDRGLCGGFNNAIIKKAESRIAELKDLGLDYTVISVGKKGNSYFLRRPYIPVDRFLQGGSLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVNGNCVDAAEDEFFRLTTKEGKLTVERDTVRTETVDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAVELKRTLSVVYNRERQAKITGEILEIVAGANALV 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00594 375 Pfam ATP synthase 55 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bva14g00594 375 Gene3D - 123 245 - -
Bva14g00594 375 ProSitePatterns ATP synthase gamma subunit signature. 360 373 IPR023632 -
Bva14g00594 375 Gene3D ATP synthase, gamma subunit, helix hairpin domain 276 374 - -
Bva14g00594 375 Gene3D ATP synthase, gamma subunit, helix hairpin domain 53 122 - -
Bva14g00594 375 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 54 374 IPR035968 GO:0015986|GO:0045261|GO:0046933
Bva14g00594 375 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 375 - -
Bva14g00594 375 PRINTS ATP synthase gamma subunit signature 126 145 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bva14g00594 375 PRINTS ATP synthase gamma subunit signature 219 236 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bva14g00594 375 PRINTS ATP synthase gamma subunit signature 352 373 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bva14g00594 375 PRINTS ATP synthase gamma subunit signature 321 340 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bva14g00594 375 Coils Coil 48 68 - -
Bva14g00594 375 CDD F1-ATPase_gamma 55 371 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bva14g00594 375 Hamap ATP synthase gamma chain [atpG]. 52 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bva14g00594 375 PANTHER ATP SYNTHASE GAMMA CHAIN 1 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bva14g00594 375 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 54 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00594 Bva-Chr14 2797856 2799260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00594 30 374 Primary Pumps ATPases AT1G15700 72.622 2.66e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00594 K02115 - gmx:100037480 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00594 14 2797856 2799260 Bva14g00594 14 2797856 2799260 ECH
Bva14g00594 14 2797856 2799260 Bva13g00501 13 2287230 2288772 ECH