Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00566 ATGGACTCACATAGGTTGTTGCTTTCCCGAGAAAACCCTAGAACTCTGGCGTTTTCCACTGAGCGAGTGGTCTCTTCTGCGAACGTAAAATCCATGCCCAATGAGATCGGGCAGAAGCCTCCTCCTTCGGTACTCGAACGATTCAAGGCCTTGCTCAAGGAACGGGATGATGATGTGCCACCACCCAATACTGAAGAAATTGTTCAGCTTTACGAACTACTATTGTCAGAGCTTACCTTCAATTCGAAGCCCATCATTACGGATCTTACAATAATTGCTGGAGAGCAGAGGGTGCACGGCAAGGGCATTGCTGATGCAATTTGCAACCGGATTCTCGAGGTCTCTGCGGAGCAAAAGCTTCCTTCGCTCTATCTTTTGGACAGTATTGTGAAGAATATTGGCCGCGATTATGTTAGACACTTCTCTTCACGGCTACCTGAAGTTTTTTGTGAGGCCTTCAGGCAGGTTCAGCCTAATTTGCATAATTCTATGCGCCATCTTTTTGGCACCTGGTCAACAGTGTTTCCAGATTTTGTCCTTCGCAAGATTGAAGCTCAGTTGCAATTTTCTAAAGTAGCTAATGGTCAACTGTCAAACGCTAATCCCCTGAGGGTGTCTGAATCTTCTCGAACTCATGGCATACATGTTAATCCAAAATACTTGCGGCAGTTGGAGTCCTCATCTGTGGATAGTGTGGCAGGTGAAAGGTTCGATTCTACAGGAAGTGCAGTTCAAACTAGTTACGGCCTTGGAGCTAATAAGATGCATCCATCTGTAACTAGTAGACTTGGAAAAGCCTCGTCCCCTTTATCAGTGTCTATAGATGAGTATGCAGTTGAGAATTCTACTGGCAGGGCAGTTGACAGAGTCTCTCCTTCTCATCCTGCATTTGATTATGGACTGGGTAAAAAAATAGGTAGAGATGAGGAGTTGAGTGAATGGCAGCGAAAACCCTATTCTGGTGTTGGTCGCagtcaatttcaaatttctaaaACATACAGCTTTAGTAATGGACTTCAACGTCAAAGCCCAAGAGCTTTAATTGATGCATATGGTAGTGAAAAAGGCACAGAAGCTTCTAGCAATGAGCCTTTGTTGGTTGAACGGCTGAATGTAAATAGCATAGACAAGAAGGTGGTATCTACCTCATGGAAGAATAGTGAAGAGGAGGAATTTGATTGGGAAGATATGAGCCCAACATTAGTTGATCATAATAGAAGTAATGGTTTTCTGCCATCAGCTGTTCTCTCTAGAGAAAGACCTGGTTTTGTTACAGCTAATGCAGCTTCTTTGGATCAAGATACCAGGAGCAGTTGGACAAGTCGGTCTCAGCTTCCTCTATTTGAAGATTCTTCTGTTATAGTAGATGATGTGATTGCTTCTTCGGGTTATGGTCGTGGATCACTGGGTCAGGTATCTGGCTTTCAAGCTCAAAAAAATCAGAATCTGGGTTCCCGTCATCCTCATGATGGATGGAGTATTTTGCATCAGTCTTCTTTGCAGCACCCTTTTAATGGTAGAGGACGAGGAAGGAATGTTCACATGTCTCCGAATGATAACATTCCTAATGCTGATATAAGACCATATGGGATTCGACCTTCTGTATCTAGAATGGGCTCATCTGGTCTTGAGTCTAATGTGGAGGCACGCCCGTCAGTTTTGCCCTCACCCTTTGGGATGAGGCCTCCCATGAATGTTCACACGACACGTCCACCAAACATAAATCCAACTTTTCCTTTCCAAAAGCATATTAGGAGTCAGTTCGAGACGATAAATGCTAACAACACCATTCTGAATCAAGGTCCAAATAAATCCCTGCTTGTGCCTGAGCAGCAGTTGGATGCCCTTGAGAACAAGGATCCAAGTAAATCAAAGCTATCGCAGTTGCCTAATCCACTTGCTGGGTTGATTTCATTAAACCAGCAAAACCGTGGACAAGTCACTACCTCACCAAGGCATGGTGCTGTTACAAGTACAGCCGTGTCAAATACATTACCTGTTGTACAATTCCCTTTACCCGTCTCGAATATTGCAAATAACTCTTTTCATTTACAGGGGGCAAGGCTGCCCCCTTTACCTCCAAATCTCCCTACTGCTCCTTCACAAGCGATAACTCATCCAAATCCTAACCCATTTGTATCAAGCCAACAGCCAACCGGTGCATTTTCTGGTTTGATTGATTCTCTTATGGCTCAAGGATTGATCTCATTGACTAAACAATCTCCTGTACAGGATTCTGTAGGGATTGAGTTTAATCCCGATGTTCTGAAAGTTCGTCATGAGTCTGCCATTAGTGCCTTATATACTGATCTTCCTAGACAATGTACAACCTGTGGCCTCCGATTTAAGTGTCAAGAGGAGCATAGTAATCATATGGATTGGCATGTGACAAAGAACCGAATGTCTAGAAGTCGTAAGCAGAAACCTTCTCGTAAGTGGTTTGTGAGTCAGAGCATGTGGCTTAGTGGTGCAGAGGCATTAGGGGCAGAGGGTGTTCCTGGTTTTCTGCCAACTGAGACCatggaggaaaagaaagatgatGAAGAGGTGGCTGTGCCAGCTGATGAGGATCAGACTACATGTGCATTATGCGGAGAGCCGTTTGATGAATTTTACAGTGATGAAACGGAGGAATGGATGTATAAAGGAGCTGTATACCTCAATGCACCCAAGGGAGCAACAGCAGGCATGGATAGGTCTCAGTTAGGTCCCATAGTTCATGCCAAATGTAGATCCGAGTCTAGTATGGTTCCCCCTGAAGATTTTGGACAGGATGAAAGGGGAACCAATGAAGAGGGTAGCCAAAGAAAACGAATGCGGAGTTA 2825 0.4393 MDSHRLLLSRENPRTLAFSTERVVSSANVKSMPNEIGQKPPPSVLERFKALLKERDDDVPPPNTEEIVQLYELLLSELTFNSKPIITDLTIIAGEQRVHGKGIADAICNRILEVSAEQKLPSLYLLDSIVKNIGRDYVRHFSSRLPEVFCEAFRQVQPNLHNSMRHLFGTWSTVFPDFVLRKIEAQLQFSKVANGQLSNANPLRVSESSRTHGIHVNPKYLRQLESSSVDSVAGERFDSTGSAVQTSYGLGANKMHPSVTSRLGKASSPLSVSIDEYAVENSTGRAVDRVSPSHPAFDYGLGKKIGRDEELSEWQRKPYSGVGRSQFQISKTYSFSNGLQRQSPRALIDAYGSEKGTEASSNEPLLVERLNVNSIDKKVVSTSWKNSEEEEFDWEDMSPTLVDHNRSNGFLPSAVLSRERPGFVTANAASLDQDTRSSWTSRSQLPLFEDSSVIVDDVIASSGYGRGSLGQVSGFQAQKNQNLGSRHPHDGWSILHQSSLQHPFNGRGRGRNVHMSPNDNIPNADIRPYGIRPSVSRMGSSGLESNVEARPSVLPSPFGMRPPMNVHTTRPPNINPTFPFQKHIRSQFETINANNTILNQGPNKSLLVPEQQLDALENKDPSKSKLSQLPNPLAGLISLNQQNRGQVTTSPRHGAVTSTAVSNTLPVVQFPLPVSNIANNSFHLQGARLPPLPPNLPTAPSQAITHPNPNPFVSSQQPTGAFSGLIDSLMAQGLISLTKQSPVQDSVGIEFNPDVLKVRHESAISALYTDLPRQCTTCGLRFKCQEEHSNHMDWHVTKNRMSRSRKQKPSRKWFVSQSMWLSGAEALGAEGVPGFLPTETMEEKKDDEEVAVPADEDQTTCALCGEPFDEFYSDETEEWMYKGAVYLNAPKGATAGMDRSQLGPIVHAKCRSESSMVPPEDFGQDERGTNEEGSQRKRMRS 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00566 941 Pfam CID domain 75 172 IPR006569 -
Bva14g00566 941 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 39 916 - -
Bva14g00566 941 SMART 558neu5 66 188 IPR006569 -
Bva14g00566 941 CDD CID_Pcf11 68 188 - -
Bva14g00566 941 MobiDBLite consensus disorder prediction 910 941 - -
Bva14g00566 941 ProSitePatterns Zinc finger C2H2 type domain signature. 775 795 IPR013087 -
Bva14g00566 941 Gene3D - 60 189 IPR008942 -
Bva14g00566 941 MobiDBLite consensus disorder prediction 537 559 - -
Bva14g00566 941 ProSiteProfiles CID domain profile. 63 191 IPR006569 -
Bva14g00566 941 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 39 916 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Bva14g00566 941 SUPERFAMILY ENTH/VHS domain 62 188 IPR008942 -
Bva14g00566 941 MobiDBLite consensus disorder prediction 924 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00566 Bva-Chr14 2672316 2678040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00566 713 941 C2H2 Transcription Factor Family AT4G04885 74.236 3.30e-111 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00566 K14400 - gmx:100794796 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00566 14 2672316 2678040 Bva14g00566 14 2672316 2678040 ECH