Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00564 ATGTTTCAGTCAAATATATTTGAGACTATGCTGGACATGTCCCACAGGACATCCTCTGAGAGTGATTTAGGAAGGACCAACAAAGATGATGATTATGAGAGCAAATCAGGCACTGAGACCATGGATGCTCCGTCCGGCGACGACCAAGATCCCAACAAAAGACCCAAAAAGAAGCGCTACCACCGCCACACCCAGCGCCAAATACAAGAGATGGAAGCCTTCTTCAAGGAGTGTCCTCATCCAGATGACAAGCAAAGGAAAGAACTTAGCCGAGAGCTGGGGTTAGAGCCTTTACAAGTCAAATTTTGGTTCCAAAACAAGCGGACCCAGATGAAGGCTACACATGAACGTCATGAGAATTCTATTCTCAAGTCTGAGAATGAAAAGCTTCGTGTTGAGAACAACAGGTACAAGGAAGCCTTAAGCAATGCCAGCTGCCCCAACTGTGGAGGCCCAGCTGCTCTTGGTGAAATGTCCTTTGATGAGCAGCACTTGAGGATTGAGAATGCTCGTTTGAGAGAAGAgATTGATAGGATATCAGGGATTGCGGCTAAATATGTTGGAAAACCCGTGACTTCCTTCTCTAGCCTTTCACCTCGTGTGCCTTCTGGCTCGCTTGATCTTGGGGTTGGGAACTATGGAGCACAATTAGGCATGGTAGGGGAAATGTATGGATCCAGTGACCTTCTTAGGTCACTTCCAGTTCCTAATGAAGCTGACAAACCCATGATTGTGGAGCTTGCTGTTGCGGCAATGGAGGAACTAACAAGACTAGCTCAGGCTGGAGAACCCTTGTGGGTCCCAAATGAACACTCTACAGAGATTCTAAATGAAGAAGAATACTTGAGGGCATTCCCTAGAGGAATTGGTCCCAAGCCCTTGGGGCTAAAATCTGAAGCTTCAAGAGAAACCGCGGTGGTCATTATGAATCATATTAGCCTCGTTGAGATTCTTATGGATGTAAATCAATGGTCAAATGTGTTTTGTGGTATTGTTTCGAGAGCATTGACACTAGAAGTCCTCTCAACTGGAGTGGCAGGAAACTATAACGGAGCCTTGCAAGTGATGTCGGCGGAGTTCCAGGTACCTTCACCACTTGTTCCTACTCGTGAGAACTATTTTGTGAGGTACTGTAAGCAACACCCAGATGGGACATGGGCAGTGGTTGATGTTTCCTTGGATAACCTGCGTCCTAGTTCAATAtcaagaagcagaagaagGCCTTCTGGCTGTATAATTCAAGAATTGCCAAATGGTTACTCGAAGGTTACGTGGATTGAGCATGTTGAAGTGGATGATAGATCTGTACACAACATATATCGACCTCTTGTTAATTCTGGCCTTGCCTTTGGAGCTAAGCGGTGGCTGGCTACATTAGAGAGACAATGTGAACGTCTTGCTAGCTCCATGGCCAGCAACATACCTGCAGGAGACCTTTGCGtgaTAACCAGTACGGAGGGAAGGAAAAGTATGCTGAAGCTGGCAGAGAGAATGGTGATGAGCTTTTGTACTGGTGTGGGTGCTTCAACAGCACATGCTTGGACACAACTATCAGCAACAGGGTCCGATGATGTAAGGGTCATGACCAGGAAGAGTATGGATGATCCAGGCAGACCACCTGGTATTGTGCTCAGTGCTGCTACTTCCTTCTGGCTTCCGGTTCCTCCGAATAGGGTTTTCGATTTCCTTCGAGATGAAAACTCTAGAAGTGAGTGGGATATTCTCTCTAATGGAGGTCTTGTTCAAGAAATGGCACACATAGCAAATGGTCGGGATCCAGGCAACTGTGTGTCGTTACTTCGCGTAAATAGTGTGAATTCCAGTCAAAGTAACATGCTGATACTTCAAGAGAGTAGCACTGACTCTACAGGCTCATATGTAGTATATGCTCCAGTTGATATTGTTGCCATGAATGTGGTCTTAGGCGGCGGAGACCCAGATTATGTTGCTCTCCTTCCCTCCGGTTTTGCTATTCTTCCCGATAGGCCTGCAGGACTAAATGGAGGGCCAATTCTTGAGGTTGGATCTGGAGGTTCTCTATTAACAGTTGCATTTCAGATCTTAGTTGATTCAGCTCCAACAGCAAAACTGTCCCTAGGTTCAGTGGCCACTGTTAACAGTTTAATTAAGTGCACAGTTGAAAGGATCAAATCTGCAGTGATGGGTGACAATACAGCACATAGTTG 2186 0.457 MFQSNIFETMLDMSHRTSSESDLGRTNKDDDYESKSGTETMDAPSGDDQDPNKRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKATHERHENSILKSENEKLRVENNRYKEALSNASCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPVTSFSSLSPRVPSGSLDLGVGNYGAQLGMVGEMYGSSDLLRSLPVPNEADKPMIVELAVAAMEELTRLAQAGEPLWVPNEHSTEILNEEEYLRAFPRGIGPKPLGLKSEASRETAVVIMNHISLVEILMDVNQWSNVFCGIVSRALTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKQHPDGTWAVVDVSLDNLRPSSISRSRRRPSGCIIQELPNGYSKVTWIEHVEVDDRSVHNIYRPLVNSGLAFGAKRWLATLERQCERLASSMASNIPAGDLCVITSTEGRKSMLKLAERMVMSFCTGVGASTAHAWTQLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWLPVPPNRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSVNSSQSNMLILQESSTDSTGSYVVYAPVDIVAMNVVLGGGDPDYVALLPSGFAILPDRPAGLNGGPILEVGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIKCTVERIKSAVMGDNTAHS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00564 728 Pfam START domain 247 465 IPR002913 GO:0008289
Bva14g00564 728 SUPERFAMILY Bet v1-like 238 467 - -
Bva14g00564 728 Gene3D - 314 470 IPR023393 -
Bva14g00564 728 CDD START_ArGLABRA2_like 241 464 - -
Bva14g00564 728 Coils Coil 115 143 - -
Bva14g00564 728 ProSiteProfiles START domain profile. 237 468 IPR002913 GO:0008289
Bva14g00564 728 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 16 723 - -
Bva14g00564 728 SUPERFAMILY Bet v1-like 486 717 - -
Bva14g00564 728 Pfam Homeodomain 57 112 IPR001356 GO:0003677
Bva14g00564 728 SUPERFAMILY Homeodomain-like 41 113 IPR009057 -
Bva14g00564 728 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 16 723 IPR042160 -
Bva14g00564 728 SMART HOX_1 55 118 IPR001356 GO:0003677
Bva14g00564 728 MobiDBLite consensus disorder prediction 13 65 - -
Bva14g00564 728 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Bva14g00564 728 Gene3D - 44 130 - -
Bva14g00564 728 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
Bva14g00564 728 SMART START_1 246 465 IPR002913 GO:0008289
Bva14g00564 728 CDD homeodomain 57 112 IPR001356 GO:0003677
Bva14g00564 728 MobiDBLite consensus disorder prediction 18 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00564 Bva-Chr14 2660643 2665904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00564 1 723 Homeobox Transcription Factor Family AT4G04890 80.514 0.0 1211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva14g00564 START 1.2e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00564 K09338 - qsu:112016283 1272.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00564 14 2660643 2665904 Bva14g00564 14 2660643 2665904 ECH