Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00559 ATGCCTAGCTTTCAACCTTTGCTAGACAAACCCAGAGGATCAATTTCCAAAACTTTGTGGCTAATTGTCTCGGTAGCTGCTGTCGTCAGCTCATTAACTCTCATTGCTTCTCATGTGATCAAACCGACCTGCTTCTTCAACCTCTACTTGCCCCATTCTCACCATGTCTGCGAAAAGGCCGTTGACAGAGCCTCTTGCATGGCTCATGTCTCAGAAGTAGCCAAAGTTTCAATCCTTACCACAAAAGACCACGAGTTGATCAAATTGCTGCAATCCCACTTGAAGAAATCAACCTCATATATTCAGAAAACTATGGACACAGCTAACACGTTGAAATACCGAATCAACAATCCAAAGGAGCAAGCTGCTCTACTTGACTGTGAACAGCTCTTGGACTTGTCCATGGACAGAGTTTGGGATTCAGTGATTGCTCTTACAAATAAGGGTATCACTTCCCAACAAGACGCACATGCTTGGCTAAGCAGTGTGCTCACTAACCACGCCACTTGCTTGGATGGTTTAGAGGGTTCAGCTCGTGCCCTCATGGAGGCAGAGCTGGAGGACTTGATCTCGAGAGCAAGAACCTCTCTGGCCATGCTTGTTTCCGTTTTGCCTCCAAAGGCTGAAATAATTGAGGAGCCTCTAAATGGGGATTTCCCTTCTTGGGTGACAAGCAAGGATCGGAAGCTTTTAGAGTCAACGGCTAAGCAAATCAAAGCCAACGTTGTGGTTGCTAAGGATGGGAGTGGCAAATTCAAGACTGTGGCAGAAGCTGTGGCAACGGCACCAGATAACGGTAAGACAAGGTATGTTATTTATGTGAAGAAGGGAATTTATAAAGAGAAAGTTGAGATtgggaagaaaaagaggaatgTGATGCTTGTTGGTGATGGCATGGACGCCACAATGATAACCGGAAGCTTGAATGTTGTGGATGGAAGCACCACCTTCAATTCTGCCACAGTGGCTGCTGTTGGTGATGGGTTTATAGCCCAAGACATTGGCTTCCAAAACACAGCGGGGCCGCAGAAGCACCAAGCAGTGGCACTCCGAGTCGGTGCCGATCAATCAGTGATAAACCGCTGCAAAATCGACGCCTTCCAAGACACACTCTATGCCCACTCCAACAGGCAGTTCTACCGCGACTCCTTCATCACCGGCACCGTCGATTTCATCTTCGGAGACGCAGCAGTTGTCCTCCAAAAGTGCAAGCTAGTGGCCCGAAAGCCCATGAGTAACCAGAACAACATGATCACGGCCCAAGGTCGCATAGACCCAAACCAAAACACAGGGACTTCAATTCAACAGTGTGACGTCATACCCAGTGGTGATCTCAAGCCCGTTGTGGGCTCAATCAAGACCTACTTGGGCCGTCCATGGAAGGAGTACTCTAGAACAGTTTATTTGCAGTCGTTTCTAGATAGCCACATTGACCCAGCTGGGTGGTCCGTGTGGTCTGGGGATTTTGCTTTGAAGACTTTGTATTATGGAGAGTACTTGAACAGTGGAGCCGGTGCTGGTGTCAGCAAGAGGGTTAACTGGCCTGGTTACCATGTCATTACTGATGCAGCAGTGGCTAGAAAGTTCACTGTGGCAGAGCTCATTCAAGGTGGTGTTTGGTTGAAGAACACTGGAGTGGCCTTCACTGAGGGACTGta 1658 0.4765 MPSFQPLLDKPRGSISKTLWLIVSVAAVVSSLTLIASHVIKPTCFFNLYLPHSHHVCEKAVDRASCMAHVSEVAKVSILTTKDHELIKLLQSHLKKSTSYIQKTMDTANTLKYRINNPKEQAALLDCEQLLDLSMDRVWDSVIALTNKGITSQQDAHAWLSSVLTNHATCLDGLEGSARALMEAELEDLISRARTSLAMLVSVLPPKAEIIEEPLNGDFPSWVTSKDRKLLESTAKQIKANVVVAKDGSGKFKTVAEAVATAPDNGKTRYVIYVKKGIYKEKVEIGKKKRNVMLVGDGMDATMITGSLNVVDGSTTFNSATVAAVGDGFIAQDIGFQNTAGPQKHQAVALRVGADQSVINRCKIDAFQDTLYAHSNRQFYRDSFITGTVDFIFGDAAVVLQKCKLVARKPMSNQNNMITAQGRIDPNQNTGTSIQQCDVIPSGDLKPVVGSIKTYLGRPWKEYSRTVYLQSFLDSHIDPAGWSVWSGDFALKTLYYGEYLNSGAGAGVSKRVNWPGYHVITDAAVARKFTVAELIQGGVWLKNTGVAFTEGL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00559 552 Gene3D - 235 552 IPR012334 -
Bva14g00559 552 Pfam Pectinesterase 241 537 IPR000070 GO:0030599|GO:0042545
Bva14g00559 552 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Bva14g00559 552 TIGRFAM PME_inhib: pectinesterase inhibitor domain 56 179 IPR006501 GO:0004857
Bva14g00559 552 SMART PMEI_2 35 199 IPR006501 GO:0004857
Bva14g00559 552 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Bva14g00559 552 PANTHER PECTINESTERASE 21 550 - -
Bva14g00559 552 Pfam Plant invertase/pectin methylesterase inhibitor 55 202 IPR006501 GO:0004857
Bva14g00559 552 SUPERFAMILY Pectin lyase-like 238 551 IPR011050 -
Bva14g00559 552 CDD PMEI-like_4 65 203 - -
Bva14g00559 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 199 IPR035513 -
Bva14g00559 552 PANTHER PECTINESTERASE 21 550 - -
Bva14g00559 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00559 Bva-Chr14 2646565 2649149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00559 3 552 Carbohydrate Esterase AT1G11580 56.989 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00559 K01051 - gmx:100815836 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00559 14 2646565 2649149 Bva14g00559 14 2646565 2649149 ECH