Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00539 ATGGTTTATTCTCCAATGTTTTACAATTCCATTCAAGTCTTGCTGCTTTGTtctcttgcttttctttcagACGTTGCTTTTGCCGACCCTCCTTATGAAATTTGTTCAAGCAGCAGCCATGCAAATGGCAGTGCCTTTGAGAACAACCTTAAAAACCTCCTTCTTTCTCTACCATCAAATGCTTCTATCTCCAAATCCTATAATGCTTCTTATGGGGATGACCCAGATAAAGTTTATGGCCTCTATATGTGCCTTGATTATATTTCAAGTGAAAGCTGCCAGAATTGCATAGCCACTGCAAGGATGGACATTGTCAAACTCTGTCCTGAAGCAGAAGAAGCAGTTGTTTGGGAAGAGGAATGCCAACTGAGGTATTCCAATAGAAACTTCTTCGGAAAATTGAATATCAGCGAAAATATTGGCAAAGATAACATGCAGAATATCTCAGAACCTGAAAAATTTGAGTCGGCTGTGAATGAGATATTGTATAATATCACTGAGAAGGCAGCTTTTAGTCCTTCAGCAAACATGTATGCTACTAGAGAAGGTCCCTTTGaagataaaacaatatatgcCTTAGTACAGTGCACCAAAGATTTATCTGCTGCTAATTGCAGTACCTGCTTGAAAAGTGCCATGACTGATATACCTGGTTGTTGCTACGCCTCCATTGGTGCCAGAATTCTAACTCCTAGCTGTTACTTAAGATATGAATTTTACCCCTTCTATGAAGGTGCAACAGGACCCGCTGATCCTTCAACCAGCAACAGTAAAGGGCATAATAGTGGAAAGAAAACACGGATGATTGCAGGCATTGTGGCTGCCGCAGGATTGGcaataacatttttctctATCTGCATATTTTGTGTCATGAAGAATAAATCTGAGAAAGGTGCAAATGGAATTATCAGTCATCTAATTGAACTCAACAACTTTAGTCAACGAGAAGACAAGGGGTTTGATCTTCAGAATTTTCAGGTGAGAAATGACAGGAAAGTTGAGGAATTCTCTTATATTGATCTTGATTCTCTCTGTCTAGCTACCAGAAACTTCTCTGATTCAAACAAGCTTGGCCAAGGTGGCTTTGGCCCTGTATACAAGGGTATACTAACTGATGGCCAGGAAGTAGCAGTGAAGAGGCTTTCAACCTTCTCTGATCAGGGCACAGAGGAATTCATAAATGAGGTTCAAGTGATAATGAAACTGCAACATAAAAATCTTGTGAGGCTTCTGGGGTTTTGTGTTGATGGAGAGGAAAAGCTTcttgtttatgaatttatgCCCAATGGCAGCCTAGATGCTATCCTATTTGATCCAATGCAAGGAGCACAGCTTGATTGGAGCAAGCGTCTTAACATTATAAGTGGAGTAGCAAAAGGGATTCTTTATCTTCACGAGGATTCGCgacttaaaataattcatagagACTTGAAAACAAGTAATGTGTTGTTGGACCATCACATGAATCCAAAAATCTCTGATTTTGGAATGGCAAGAATATTTGCAGGAAGTGAAGGGGAAGCCAGTACTATCACAATAGTTGGGACATATGGATACATGGCTCCCGAGTATGCTATGGAGGGatattattctataaaatcTGATGTTTTTGCCTTTGGAGTACTCTTGCTTGAGATCATATCAGGGAAACGGAATGCTGGTTTCTATCAGTCAAAACAGGCTCCTAGCCTTCTGGCATACGCATGGCATCTACGGAATGAAGGAAAGGGTTTGGACTTTATGGATCCCTTGTTAGCAGATTCATGCAATCATCATCAATTTCTAGAATACATGCATATTGGATTACTATGCGTTCAGGAAGATGCATACGACAGGCCAACCATGTCTTCTGTCGTTTTAATGCTGCAAAGTGAATCAGCAACTCTTTCCCAACCAGAAAGACCACCATTTTTCTTGGGGAGATTCAATGATATTGTTAGCTACGAGCCAGATCGTGAACAGCACTCAGTCAATGGTTTAACTATTTCTAAAGTTGTACCTCGCTA 2006 0.3888 MVYSPMFYNSIQVLLLCSLAFLSDVAFADPPYEICSSSSHANGSAFENNLKNLLLSLPSNASISKSYNASYGDDPDKVYGLYMCLDYISSESCQNCIATARMDIVKLCPEAEEAVVWEEECQLRYSNRNFFGKLNISENIGKDNMQNISEPEKFESAVNEILYNITEKAAFSPSANMYATREGPFEDKTIYALVQCTKDLSAANCSTCLKSAMTDIPGCCYASIGARILTPSCYLRYEFYPFYEGATGPADPSTSNSKGHNSGKKTRMIAGIVAAAGLAITFFSICIFCVMKNKSEKGANGIISHLIELNNFSQREDKGFDLQNFQVRNDRKVEEFSYIDLDSLCLATRNFSDSNKLGQGGFGPVYKGILTDGQEVAVKRLSTFSDQGTEEFINEVQVIMKLQHKNLVRLLGFCVDGEEKLLVYEFMPNGSLDAILFDPMQGAQLDWSKRLNIISGVAKGILYLHEDSRLKIIHRDLKTSNVLLDHHMNPKISDFGMARIFAGSEGEASTITIVGTYGYMAPEYAMEGYYSIKSDVFAFGVLLLEIISGKRNAGFYQSKQAPSLLAYAWHLRNEGKGLDFMDPLLADSCNHHQFLEYMHIGLLCVQEDAYDRPTMSSVVLMLQSESATLSQPERPPFFLGRFNDIVSYEPDREQHSVNGLTISKVVPR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00539 668 Pfam Salt stress response/antifungal 35 127 IPR002902 -
Bva14g00539 668 Pfam Salt stress response/antifungal 146 239 IPR002902 -
Bva14g00539 668 Pfam Protein tyrosine and serine/threonine kinase 354 619 IPR001245 GO:0004672|GO:0006468
Bva14g00539 668 ProSiteProfiles Gnk2-homologous domain profile. 28 130 IPR002902 -
Bva14g00539 668 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 63 665 - -
Bva14g00539 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Bva14g00539 668 Gene3D Phosphorylase Kinase; domain 1 313 426 - -
Bva14g00539 668 SUPERFAMILY Protein kinase-like (PK-like) 335 653 IPR011009 -
Bva14g00539 668 CDD STKc_IRAK 357 623 - -
Bva14g00539 668 SMART serkin_6 351 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00539 668 Gene3D - 29 130 IPR038408 -
Bva14g00539 668 Gene3D - 139 242 IPR038408 -
Bva14g00539 668 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 63 665 - -
Bva14g00539 668 ProSiteProfiles Protein kinase domain profile. 351 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00539 668 Gene3D Transferase(Phosphotransferase) domain 1 427 634 - -
Bva14g00539 668 ProSiteProfiles Gnk2-homologous domain profile. 136 242 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00539 Bva-Chr14 2571616 2574232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00539 4 667 Receptor kinase-like Gene Family AT4G05200 40.552 1.70e-169 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva14g00539 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00539 - - gmx:102669364 867.07