Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00538 ATGGCTAAAAGGGCGATTCAACTTCATAACAAGGACATGGAGAAATATAGATTATCAGCTATGCTTTTCTTCGTCATATCCACGTTGTTATTTCTGCACTACGCTTCTGGTGCAGACCCTCTAGATACCTATTGTCCAAATGGATTCACAAATTACACACTCACCAGTCCATTTTATAATAACCTTAAGCTGCTTCTGGGGTCACTCTCCTCCAACACTTCAGTGACAGGTTTCTACAACACTTCAATTGGGGAGGACCCAGACAAAGTCCATGGACAAGCACTGTGTAGAGGGGACGCGTCTGCTGCAATTTGTCAGAGTTGCATTGGGAATGCAAGCCAAGATATCCTGAGAAGGTGCAAGAGTGAAGACTCAATGATATGGTATGAGCTTTGTCAAGTTCGGTACTCTTATCAAATGTTCTTTTCAACTTATGCTTACACTGGAAAATACCCAGAACAGAACATTCAGGAGAAGAATGTTTCCGATCCTATTCAATTCAATGAAATGCTTATGTATTTAATGAGAAAACTATCAGATGAGGCTGCATTTAATCACTCTAGAAACAAGTTCACAACTGgggaaatcaaattttctggGAACAAGAAAATTTACGGTCTGGTCCAATGTACGAGGGACATGTCTGAAACATATTGCTTTAACTGTCTGAGTTCTGCGGTGGCAGACCTTAGAGCATGCTGCTCCTATCGTGAAGGTGGCATCATTCTTAGCCGGACTTGCAATGTGAGGTTTGAACTGTCTCAGTTCTTTAACACTTCATATTACCAGTTGAATTATGCAACTTCCAAAGCAGGAGGGAAATGGAAGCTCTGggttattttattgattacatGTGCATCAGTTATAGTCTTAGCTATTGTTGTTGGCGCATGTGCTGTTTATATCAGGAGAAAACAAGGGAGAGACAGAGatgaagaaaagaacgAAAAGACGCTACTACAAGAATTAGCAAGTCCCAAGGGAGTGACAGTTACTGAAGATGGAGAATTGGTTAGTTCTGAGGAATTGGTGTTCATGAATTTAGAAACCATTAGGGAAGCTACTGATGATTTTTCTGATAGAAATAAGCTGGGACAAGGAAGTTTTGGTGCAGTATACAAGGGTGTTCTACCTGATGGGAATGAAGTAGCAATTAAGAGATTATCAAGAAAGTCTTGGCAAGGAATAGAGGAATTCAAAAACGAACTCATACTAATTGCTAAACTCCAACACAAGAATCTAGTGAGGCTATTGGGCTGTGGCTTGGAGGGAGATGAGAAGCTGCTCATATATGAATTCATGTCCAACAAAAGTCTTGATGAATTTATCTTTGATGCTAAACGACGTTTAGAACTTGACTGGAAGACATACCATGgaagagaaatagaatttGTGGATGCTACCTTGCTAGAAGCATGCCCTGCCTCTGAAGTTATAAACTGGATGCATGTTGGGCTTCTGTGTGTGCAACAAGACCCAGGAGATAGACCCAGCATGTCAGATGTGGTGGTTCATCTTGGAAGTGAATCAATGGAACTTCCAAAGCCGAAACAACCAGCATTTTCTTTGCGTAAAGCAGTTCCAGTTGATCCATCTTCACTAACAGATTCCTCTGCGAATAAGCTTCTGGCATCCTCTTCTGTTTTGGCACGATA 1655 0.3976 MAKRAIQLHNKDMEKYRLSAMLFFVISTLLFLHYASGADPLDTYCPNGFTNYTLTSPFYNNLKLLLGSLSSNTSVTGFYNTSIGEDPDKVHGQALCRGDASAAICQSCIGNASQDILRRCKSEDSMIWYELCQVRYSYQMFFSTYAYTGKYPEQNIQEKNVSDPIQFNEMLMYLMRKLSDEAAFNHSRNKFTTGEIKFSGNKKIYGLVQCTRDMSETYCFNCLSSAVADLRACCSYREGGIILSRTCNVRFELSQFFNTSYYQLNYATSKAGGKWKLWVILLITCASVIVLAIVVGACAVYIRRKQGRDRDEEKNEKTLLQELASPKGVTVTEDGELVSSEELVFMNLETIREATDDFSDRNKLGQGSFGAVYKGVLPDGNEVAIKRLSRKSWQGIEEFKNELILIAKLQHKNLVRLLGCGLEGDEKLLIYEFMSNKSLDEFIFDAKRRLELDWKTYHGREIEFVDATLLEACPASEVINWMHVGLLCVQQDPGDRPSMSDVVVHLGSESMELPKPKQPAFSLRKAVPVDPSSLTDSSANKLLASSSVLAR 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00538 551 Gene3D Phosphorylase Kinase; domain 1 318 430 - -
Bva14g00538 551 ProSiteProfiles Gnk2-homologous domain profile. 40 141 IPR002902 -
Bva14g00538 551 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 458 - -
Bva14g00538 551 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 458 546 - -
Bva14g00538 551 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Bva14g00538 551 ProSiteProfiles Protein kinase domain profile. 358 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00538 551 ProSiteProfiles Gnk2-homologous domain profile. 149 256 IPR002902 -
Bva14g00538 551 Pfam Salt stress response/antifungal 45 137 IPR002902 -
Bva14g00538 551 Pfam Salt stress response/antifungal 159 252 IPR002902 -
Bva14g00538 551 Gene3D - 149 256 IPR038408 -
Bva14g00538 551 Gene3D - 40 141 IPR038408 -
Bva14g00538 551 Pfam Protein tyrosine and serine/threonine kinase 362 456 IPR001245 GO:0004672|GO:0006468
Bva14g00538 551 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 458 - -
Bva14g00538 551 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 458 546 - -
Bva14g00538 551 SUPERFAMILY Protein kinase-like (PK-like) 342 456 IPR011009 -
Bva14g00538 551 Gene3D Transferase(Phosphotransferase) domain 1 431 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00538 Bva-Chr14 2567589 2570151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00538 454 524 Receptor kinase-like Gene Family AT4G05200 40.278 1.61e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva14g00538 PK_Tyr_Ser-Thr 1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00538 - - lja:Lj1g3v0052350.1 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00538 14 2567589 2570151 Bva14g00538 14 2567589 2570151 ECH