Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00530 aTGTCTTCCCTCAACAATCTTTCACTCTTCCTCTACACACTTGGCCTTGTAACTCTTACAGCTGCTTCTTCAAACAATTATCACGTTTATCACAACTGCACCGGAAGCACTTTAGCCCAAAATAGTTCCTACCAGCTCAACCTTAACCATCTGCTATCTTCCCTCTCCTCCCTCGCCGCCAACAGCAACGGATTCTACAACACCACCGTAGGCAGTACTGCCTCAGACACCATCTATGGCCTATTCATGTGCCGTGGAGACATCCCAGCAAACGAGTGTAAAGAATGCGTAATAAatgcaaccaaaaaattatcctCGGATTGTGCCATGAAGAAAGAAGCCATAACATGGTTCGACAAATGTTTGGTGCGCTACTCCAATAGAGATTTCTTCACAGCCACGGATGAAGGGCCTGTGAGTGGCTTCTCCAACGAGGAGAACTTGTCACGAGATTGGgacaaattcaagaaaatactCAGTTCCTTGATGAATGATCTGGCTATAGCTGCTAACGATGGTCCAACGGCTTCTAGAAGATTTTCTGCTAAACAAGTAAAGCttgatggtggtggtggtggtgaacATGACACGCTGTACGGTCTAGCTCAATGTTTGCCATATCTGAGCAGGGCAAATTGCAAGAGGTGCCTGAGGGATGCTAGTGCTGGTTTTGACAAGTGCTGTAGAGGGAAGATTGGAGCAAAATCTCTGTCTCCCAGCTGTGGTGTTAGATACGAAATTTATCCATTTTACTCTACAGATGATGATCATGCAGTGCGAGGAAAAAGACAAATCTCGTCCCTAGCAATTATACTGATTGTTGTTGCGGCTGCTGTTTCTTTGGTGCTTTGCTCTTTAAGCTGCTGTATCCTGCGTAGAAAAGCAAGGAAGAATCGGAAAGCTATTctgaaagaaaattTTGGAGAAGAGATAAGCAAAGATCTGGAGTCATTGCAATTTGATTTTGGTACAATTGAAGCTGCAACCAACAAGTTCTCCAATGAGAATATGATAGGTGTAGGTggatttggagaagtttacaagGGTACTCTTTCTAATGGACTAGAAATAGCTGTTAAAAGACTTTCAGAAAGATCTGCACAGGattttggcATGGCAAAAATGGTTAGTGTggatcaaaatgaagaaaatacttGTAGAATTGTTGGAACATAtgGTTATATGTCTccagaatatataatatttggtcAGTTTTCTGTGAAATCCGATGTGTTTAGTTTTGGAGTCATGGTTCTTGAGATTATaagtggaaaaagaaatgcatcTTCATCCTCTCATCAACTACATCTCCTGGATGACCTCTTAAACTATGCGTGGAGACAGTGGAAGGAGAAGACACCCTTTGAATTGTTGGATCCAAGTTTAGAAGGGTGTTACTCTAAGATTGAAGCCTTGAGATGTATCCAGATTGGGCTACTGTGCGTACAAGAAGACCCAGATGAGAGACCAACAATGGCAGCAGTCACTCTTATGCTTAACAGTGATTCAGTTGATTTGCCATTACCAGGGCTCCCAGGCTTCTTTACATGCAGCAGAAGCAAGTCAAATTTATCCAAGATGGAGATGAATCCTGCTCTATCTGTTAATGATTCAGTGCCACTTACCGTCAATGAAACCTCCATAACTAAATTTTCACCACGATA 1664 0.3864 MSSLNNLSLFLYTLGLVTLTAASSNNYHVYHNCTGSTLAQNSSYQLNLNHLLSSLSSLAANSNGFYNTTVGSTASDTIYGLFMCRGDIPANECKECVINATKKLSSDCAMKKEAITWFDKCLVRYSNRDFFTATDEGPVSGFSNEENLSRDWDKFKKILSSLMNDLAIAANDGPTASRRFSAKQVKLDGGGGGEHDTLYGLAQCLPYLSRANCKRCLRDASAGFDKCCRGKIGAKSLSPSCGVRYEIYPFYSTDDDHAVRGKRQISSLAIILIVVAAAVSLVLCSLSCCILRRKARKNRKAILKENFGEEISKDLESLQFDFGTIEAATNKFSNENMIGVGGFGEVYKGTLSNGLEIAVKRLSERSAQDFGMAKMVSVDQNEENTCRIVGTYGYMSPEYIIFGQFSVKSDVFSFGVMVLEIISGKRNASSSSHQLHLLDDLLNYAWRQWKEKTPFELLDPSLEGCYSKIEALRCIQIGLLCVQEDPDERPTMAAVTLMLNSDSVDLPLPGLPGFFTCSRSKSNLSKMEMNPALSVNDSVPLTVNETSITKFSPR 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00530 554 Gene3D Transferase(Phosphotransferase) domain 1 309 364 - -
Bva14g00530 554 Gene3D Transferase(Phosphotransferase) domain 1 365 505 - -
Bva14g00530 554 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Bva14g00530 554 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Bva14g00530 554 Gene3D - 139 250 IPR038408 -
Bva14g00530 554 Gene3D - 25 130 IPR038408 -
Bva14g00530 554 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 21 257 - -
Bva14g00530 554 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 263 368 - -
Bva14g00530 554 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 369 545 - -
Bva14g00530 554 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Bva14g00530 554 Pfam Salt stress response/antifungal 150 247 IPR002902 -
Bva14g00530 554 ProSiteProfiles Gnk2-homologous domain profile. 136 250 IPR002902 -
Bva14g00530 554 SUPERFAMILY Protein kinase-like (PK-like) 320 525 IPR011009 -
Bva14g00530 554 Pfam Protein kinase domain 369 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00530 554 ProSiteProfiles Protein kinase domain profile. 152 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00530 554 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 257 - -
Bva14g00530 554 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 263 368 - -
Bva14g00530 554 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 369 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00530 Bva-Chr14 2542171 2545183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00530 17 554 Receptor kinase-like Gene Family AT4G23280 34.466 6.03e-97 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva14g00530 Pkinase 1.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00530 - - gra:105775117 335.88