Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00508 ATGAACACCCCAGCCAAGCAATACCCTGAGTTCTTCAAAGTCTTCCTCCCAGAGAAGAGCTGTGAAAGAATGCTTATCCCCGATGCTTTTGTTAAAAGGTTAAGTGGAAGAAAGCTACCTGAGAAAGCCATCCTTAAAGGTCAAAGTGGGAGAGTTTGGCATGTCTGCGTGCGTAATATTCAGGGTCACATGTCTTTTGATAGTGGGTGGAAAAAGTTCTTGAAAGCCAATTCTTTAAAGGCTGCAGACTTTCTTGTCTTTAAATATGATGGAGGTGATACATTTATGGTGAAAATCTATGACAAATCAGGTTGtgtaaagaaaatgataaaggaggaggaggaggaggaggacgACGACGACGATGACGAAGATTTTGATGACAGAAATGTTGAAGAGGtggatgatgaagatgaagattttgaagaagtttacgttaaagagaaggagaaggagaaggagaaagagggaagtggaaaaatgaaaactccGCACCGTTGCAAAAGTCCCAGGAGGACTGCAGGAATACTTCCCTGCAATGCTGAAGAGTATGGAATTGATGTGAAAAAGTGTGTTCAGCCAAAGAATCCATACTTTATCACAACACTGAAGAAATCAACGAGGAAGAATGACCTGCATATTCCAAGAATCGTAGGAGACTATAATCTGAGCTTgccagaaaagataactctgcAGGGTCCAATTTATGATACAATAGGAAAGGTTAAAACATGGCAGGATGGCCGAGTTTACATAAATGGCTGGAGGTCCTTTTGTTATTTGAACAAGATCACTGGAAACGATATATGCATCTGTGAGTTTATGCTGGAAACTAAGACCATGAAGGTGCATGTTGTTCCAGGGCCGGTCTG 872 0.344 MNTPAKQYPEFFKVFLPEKSCERMLIPDAFVKRLSGRKLPEKAILKGQSGRVWHVCVRNIQGHMSFDSGWKKFLKANSLKAADFLVFKYDGGDTFMVKIYDKSGCVKKMIKEEEEEEDDDDDDEDFDDRNVEEVDDEDEDFEEVYVKEKEKEKEKEGSGKMKTPHRCKSPRRTAGILPCNAEEYGIDVKKCVQPKNPYFITTLKKSTRKNDLHIPRIVGDYNLSLPEKITLQGPIYDTIGKVKTWQDGRVYINGWRSFCYLNKITGNDICICEFMLETKTMKVHVVPGPV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00508 290 MobiDBLite consensus disorder prediction 113 143 - -
Bva14g00508 290 SUPERFAMILY DNA-binding pseudobarrel domain 193 285 IPR015300 -
Bva14g00508 290 Gene3D - 3 105 IPR015300 -
Bva14g00508 290 SUPERFAMILY DNA-binding pseudobarrel domain 7 105 IPR015300 -
Bva14g00508 290 CDD B3_DNA 9 101 IPR003340 GO:0003677
Bva14g00508 290 Pfam B3 DNA binding domain 11 102 IPR003340 GO:0003677
Bva14g00508 290 MobiDBLite consensus disorder prediction 144 163 - -
Bva14g00508 290 PANTHER B3 DOMAIN-CONTAINING 6 284 - -
Bva14g00508 290 MobiDBLite consensus disorder prediction 112 169 - -
Bva14g00508 290 Gene3D - 181 287 IPR015300 -
Bva14g00508 290 ProSiteProfiles B3 DNA-binding domain profile. 9 103 IPR003340 GO:0003677
Bva14g00508 290 SMART B3_2 11 103 IPR003340 GO:0003677
Bva14g00508 290 SMART B3_2 199 289 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00508 9 285 B3 DNA Binding Superfamily AT3G06160 28.525 4.11e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva14g00508 B3 1e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00508 - - gmx:100810594 169.859