Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00468 atgAGCTGCAACGGTTGTCGTGTCCTGCGAAAAGGTTGCAGCGACGATTGCATGCTCCGGCATTGCCTCCGTGGGATTGACAATCCACAAGCCGAATCTCATGCCACTCTCTTCGTCGCCAAGTTCTTCGGCCGCGCCACCCTCATGTCTTTCGTTTCTGCCGTTCCCACAACCCAAAGACCTGCTTTGTTTCGGTCGCTACTGTATGAAGCGGTGGGACGAACTATAAATCCGGTGAATGGAGCGGTGGGATTGCTTTGGACTGGCAATTGGCATCTCTGCCAGGTCGCCGTGGAAACAGTGCTCCGTGGTGGCGCGTTGAGCCCGCTCCCTCAGTTCTGTGGTGAGGTGGGGAATTTTCAACCGCAGGATCGGTTTCAGTCCTTATTAGGGAGACCAAGTTTGCCAGAGACTGTACTGATGATAGGCGGTGGAAGGAGTCATCAGCGACCAAAGAAGCGGAGGGCGGCGACACCCTCTGAGGAATCTGATACGACGGTCGACTGTGCTGCACAAGACAGAGGCGGTAATGAAAGGAAGCTCTTGAGACTCTTTTTCTG 560 0.5446 MSCNGCRVLRKGCSDDCMLRHCLRGIDNPQAESHATLFVAKFFGRATLMSFVSAVPTTQRPALFRSLLYEAVGRTINPVNGAVGLLWTGNWHLCQVAVETVLRGGALSPLPQFCGEVGNFQPQDRFQSLLGRPSLPETVLMIGGGRSHQRPKKRRAATPSEESDTTVDCAAQDRGGNERKLLRLFF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00468 186 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Bva14g00468 186 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 185 - -
Bva14g00468 186 MobiDBLite consensus disorder prediction 144 167 - -
Bva14g00468 186 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Bva14g00468 186 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00468 Bva-Chr14 2249345 2250082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00468 1 113 AS2 family AT3G49940 74.336 3.52e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva14g00468 LOB 2.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00468 - - lja:Lj5g3v2099760.1 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00468 14 2249345 2250082 Bva14g00468 14 2249345 2250082 ECH
Bva13g00376 13 1746990 1747662 Bva14g00468 14 2249345 2250082 ECH
Bva10g00654 10 5631738 5632725 Bva14g00468 14 2249345 2250082 ECH