Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00456 ATGGGGTTCACAACATCGATCAAAAACAGCGGGCgatcaaagaaaacaaaagaatttatcGATGCCAAATTTGCGTGCTCTAGGTATGGAGCCACACCTGAGTCAGATGGTAGTAGTAGTCGAAGATCAAGTGTAAACAAGACAGATTGTAAAGCGTGCATGCATGTGAAGAGAAGGCCAGATGGAAAGTGGATAATTCATGAATTCATAAAGGACAATGATCATGGATTTCTACCTGCTTTGGCATGTCATTTTCGGATTCATAGAAATGTGAAGCTAGctgaaaagaataatattgatattttgcATGCTGCGAGTGAACACACCAGAAAGATGTTTGTTGAATTGTCTAGGCAATCTGGTGGCTGTCTAAATGTTGGGTCTATCCACGGTGACATAAATTATCAGTTTGATAGACGGCAGTATTTGGCTTTGGAGGAGGGAGATGCTCAAGTTATGCTTGAATATTTTTA 473 0.3721 MGFTTSIKNSGRSKKTKEFIDAKFACSRYGATPESDGSSSRRSSVNKTDCKACMHVKRRPDGKWIIHEFIKDNDHGFLPALACHFRIHRNVKLAEKNNIDILHAASEHTRKMFVELSRQSGGCLNVGSIHGDINYQFDRRQYLALEEGDAQVMLEYF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00456 157 Pfam FAR1 DNA-binding domain 1 78 IPR004330 -
Bva14g00456 157 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 156 IPR031052 GO:0006355
Bva14g00456 157 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00456 Bva-Chr14 2207439 2207912 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva14g00456 FAR1 6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00456 - - gmx:100805377 271.552