Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00452 ATGACGAGCGCTTCGGAGCTATTCTATAATAGGAGGCATCGTTTTGGACGAACGACGAATGACCTAGGGTTCGATTCCTCTTCCGCTGGAGACCTTAATTTCAATAACCGTCgccatcatcttcatcatcgtCGACATGATTTGGACGATGATGAAGCTCTGCGACGGGCCACGCATATGCGGCTGTTCTGTCACCGCCCCTCCCATGCGGAATATGCATCTGGTCGACTTGGCCTGGGTTCTAACTGGTCTCTCTCAAGGAACAGTACCAATGCTGCAGAGAATGTAAGTAGCTTAAGTAATCCTAGAATGACTGGCAATGAAAGACTTCCTATAGCTGTGCTGCTTGCAAGGGCAAGACTCGTTGAAAGGTTGAGAGGGACGCCAATCTCTCAAAACAGACAAAGTGGGATAAGTTCTGTGGGCGTTGATGAATCGAGGGGTGTTTACTCTGTGGATCAAGACAGTGAACTCTGGACTTCACGAATGAGAATATCCCAGTCACAGTTCTTGCAAGAACTGAACACAAAGCCCCCTGGCCTCACTCAGGAGGCCCTGGACTGTTTGCATATGGAAGTTTTCAGCAGCGGGGAAACAGGAGTGGAAGGATCGCAATCTGGAATAGTGCATGATTGTGGCATATGTTTGGAATTTTTCTTGGATGGAGATGAACTGATATGCTTGCCATGTGGACACAGATTTCACTCTGGTTGCTTGGCTCCTTGGGTTCGCAGTTGTGGGGACTGCCCATTCTGTCGAAGAAGTATAGTTGTTAAGTA 779 0.4698 MTSASELFYNRRHRFGRTTNDLGFDSSSAGDLNFNNRRHHLHHRRHDLDDDEALRRATHMRLFCHRPSHAEYASGRLGLGSNWSLSRNSTNAAENVSSLSNPRMTGNERLPIAVLLARARLVERLRGTPISQNRQSGISSVGVDESRGVYSVDQDSELWTSRMRISQSQFLQELNTKPPGLTQEALDCLHMEVFSSGETGVEGSQSGIVHDCGICLEFFLDGDELICLPCGHRFHSGCLAPWVRSCGDCPFCRRSIVVK 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00452 259 PANTHER SI:CH211-59O9.10 1 258 - -
Bva14g00452 259 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED 1 258 - -
Bva14g00452 259 SMART ring_2 212 252 IPR001841 -
Bva14g00452 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 167 257 IPR013083 -
Bva14g00452 259 CDD RING-H2_PA-TM-RING 211 253 - -
Bva14g00452 259 Pfam Ring finger domain 211 253 IPR001841 -
Bva14g00452 259 SUPERFAMILY RING/U-box 211 258 - -
Bva14g00452 259 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00452 Bva-Chr14 2197524 2200063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00452 1 257 C3H Transcription Factor Family AT1G49850 42.529 3.10e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00452 - - cit:102616524 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00452 14 2197524 2200063 Bva14g00452 14 2197524 2200063 ECH