Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00439 ATGGGTGATCAGGAAAATCATGTGCGCTCAATCCTTTCTTCGAAGAAACGGCCGCCGCCAGCGATTGATCCTCTTCAGTTGCCGGCATCAAAGACGCGGGTCCCGTTCGGTGACCTCACCAATTCTCCCAATATCGCATTGAATCAGAGCTCTGATCTCAACAAAGAGAATACTTTCATGAAGACgaacaacaagaagaaacagaaaaaattcGCCTGCGAGTCTTCTTTATACAAGCATCTTCATGCGTTGGAGATGGACGTGAACAGGAGGCCATTGCCCAATTACATGGATAAAGTTCAGAAAGATATTTCAAAGAGCATGCGTGAAGTTCTAGTTGACTGGCTAGTGGAGGTTGCAGAGGAATACAAACTGGTTTCTGACACCATTTATCTCGCCGTATCTTATGTTGATAGATTTTTATCCATACATGATATCAATAGAAGCAAACTTCAGCTTCTCGGTGTTTCTGCTATGCTTATTGCCTCGAAATACGAAGAAATTGCACCTCCAAATGTTGAAGATTTTTGCTATATAACAGATAACTCTTACACCGTGGACGAGGTCAAAGATATGGAGAAAGAGATCCAGAGTGTGCCTAACTTTGAGATGGGTAATCCTACTGCAAAAAATTTTCTCAGAATCTTCACCAAAGCTGCTCAGGAAAACTTCAAGGGTTCCAAATTGCAGTTGGAATTCATGGCTTCGTATCTTTTGGAGCTAAGCTTGTTAGACATTGTGTGCATGCAATTTTTACCATCAGTTGCAGCAGCTTCagctttatttctttcaagatTTACATTGGACTCCCAGACGCGTCCTTGGAATCTGGCCTTGCAATGCCATACGGGTTATAAGCCATCTGACTTGAAGGATTGTGTCCTTGTCATGCATGGCTTGCAATGGAATATCAAAGGAAGCTCTTTACAAGCAGTTCCAATAAAATACAGTAAAACCAAGTTTACCTGTGTATCATCATTGACTTCTCCAGATATTCCTGCAAGTTATTTTGAGCCTGTATATGAATA 1028 0.4018 MGDQENHVRSILSSKKRPPPAIDPLQLPASKTRVPFGDLTNSPNIALNQSSDLNKENTFMKTNNKKKQKKFACESSLYKHLHALEMDVNRRPLPNYMDKVQKDISKSMREVLVDWLVEVAEEYKLVSDTIYLAVSYVDRFLSIHDINRSKLQLLGVSAMLIASKYEEIAPPNVEDFCYITDNSYTVDEVKDMEKEIQSVPNFEMGNPTAKNFLRIFTKAAQENFKGSKLQLEFMASYLLELSLLDIVCMQFLPSVAAASALFLSRFTLDSQTRPWNLALQCHTGYKPSDLKDCVLVMHGLQWNIKGSSLQAVPIKYSKTKFTCVSSLTSPDIPASYFEPVYE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00439 342 Gene3D - 92 205 - -
Bva14g00439 342 ProSitePatterns Cyclins signature. 109 140 IPR006671 -
Bva14g00439 342 Pfam Cyclin, N-terminal domain 79 204 IPR006671 -
Bva14g00439 342 PANTHER CYCLINS 29 339 IPR039361 -
Bva14g00439 342 MobiDBLite consensus disorder prediction 35 51 - -
Bva14g00439 342 CDD CYCLIN 207 298 IPR013763 -
Bva14g00439 342 Gene3D - 78 326 - -
Bva14g00439 342 MobiDBLite consensus disorder prediction 1 51 - -
Bva14g00439 342 PIRSF Cyclin_A_B_D_E 13 336 IPR039361 -
Bva14g00439 342 SMART Cyclin_C_2 207 330 IPR004367 -
Bva14g00439 342 SMART cyclin_7 211 299 IPR013763 -
Bva14g00439 342 SMART cyclin_7 114 198 IPR013763 -
Bva14g00439 342 Pfam Cyclin, C-terminal domain 207 329 IPR004367 -
Bva14g00439 342 CDD CYCLIN 108 196 IPR013763 -
Bva14g00439 342 PANTHER CYCLIN-A3-1-RELATED 29 339 - -
Bva14g00439 342 SUPERFAMILY Cyclin-like 81 204 IPR036915 -
Bva14g00439 342 SUPERFAMILY Cyclin-like 207 331 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00439 Bva-Chr14 2136564 2140019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00439 1 340 Core Cell Cycle Gene Families AT1G47230 46.703 1.33e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00439 K06627 - csin:114261114 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00439 14 2136564 2140019 Bva14g00439 14 2136564 2140019 ECH