Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00418 ATGAATCGAGATTCGACAATGGAGGCGTTGCAGAAGGATTTGGATCGGGTTAAGGGACCATGGAGCCCTGACGAGGACGAGTTGTTGCAGAAGCTCGTTCAACTTCACGGCCCTCGGAATTGGTCGATTATCAGCAAATCAATCCCTGGTCGGTCCGGGAAGTCTTGCCGTCTGCGGTGGTGCAACCAGTTGTCACCGGATGTGGAGCATCGACCTTTCACTCCAGAGGAGGACGAGACCATTAGAAAGGCCCACGCCAAGTACGGCAATAAGTGGGCCACCATAGCCAGGCTCCTCAACGGTCGTACGGATAACGCGATTAAGAACCATTGGAATTCCACCTTAAAGCGCAAATACTCGTCGTTGATCGGCGATAAATCTGGTGCTGACGAGGCCCAGTTTCAACCGAGGAAAAAGCCAGCCACCGGCGATCGTGTTCCACTGGCACTGGCGAACTCAACGGGACATTGTTACAGTCCCAGTAGCCCATCTGGATCGGATGTGAGTGATTCAGGCATCGCTGTAGTATCTTCTTCTCGTCCTGTAGCGATAAATGGCGCGATCTTACCGCCTTCTCAGCAGGTGGAGTCACGCCCAAGTCCAATTAGCAACAGCGAGCCTTCAACTGAactctctctgtctcttccTGGAATGCGACAAAACTTGGGACCTTCTGTAGATCAGTGTGCATTATCGGCACCATCGCCGGCGCGGCCCGAGGAGTCGCCAGTGATGACATTTGGACCCCAGTTAATCTCTGCGATGAAGGAGATGATCAGAGATGAGGTGAGAAATTACATGACGGGGCTTGAGGAGAGGATGAGCTCGAATACTGACTGCGTGGATGTTGCTGCTGGGTTTAAACGCATCAGATTTCCAAAGCATCATTCAGCAGAATG 899 0.5139 MNRDSTMEALQKDLDRVKGPWSPDEDELLQKLVQLHGPRNWSIISKSIPGRSGKSCRLRWCNQLSPDVEHRPFTPEEDETIRKAHAKYGNKWATIARLLNGRTDNAIKNHWNSTLKRKYSSLIGDKSGADEAQFQPRKKPATGDRVPLALANSTGHCYSPSSPSGSDVSDSGIAVVSSSRPVAINGAILPPSQQVESRPSPISNSEPSTELSLSLPGMRQNLGPSVDQCALSAPSPARPEESPVMTFGPQLISAMKEMIRDEVRNYMTGLEERMSSNTDCVDVAAGFKRIRFPKHHSAE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00418 299 MobiDBLite consensus disorder prediction 153 172 - -
Bva14g00418 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Bva14g00418 299 Gene3D - 17 69 - -
Bva14g00418 299 SMART sant 17 66 IPR001005 -
Bva14g00418 299 SMART sant 69 117 IPR001005 -
Bva14g00418 299 Pfam Myb-like DNA-binding domain 21 79 - -
Bva14g00418 299 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Bva14g00418 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 64 IPR017930 -
Bva14g00418 299 Gene3D - 72 118 - -
Bva14g00418 299 CDD SANT 72 115 IPR001005 -
Bva14g00418 299 MobiDBLite consensus disorder prediction 188 210 - -
Bva14g00418 299 MobiDBLite consensus disorder prediction 154 172 - -
Bva14g00418 299 PANTHER MYB PROTEIN-RELATED 12 253 - -
Bva14g00418 299 SUPERFAMILY Homeodomain-like 15 111 IPR009057 -
Bva14g00418 299 ProSiteProfiles Myb-like domain profile. 13 64 IPR001005 -
Bva14g00418 299 PANTHER TRANSCRIPTION FACTOR MYB73 12 253 - -
Bva14g00418 299 MobiDBLite consensus disorder prediction 190 210 - -
Bva14g00418 299 MobiDBLite consensus disorder prediction 1 22 - -
Bva14g00418 299 CDD SANT 20 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00418 Bva-Chr14 2050457 2051701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00418 11 271 MYB Transcription Factor Family AT4G37260 49.481 1.35e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva14g00418 Myb_DNA-bind_6 4.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00418 K09422 - mnt:21392626 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00418 14 2050457 2051701 Bva14g00418 14 2050457 2051701 ECH
Bva13g00339 13 1589459 1590844 Bva14g00418 14 2050457 2051701 ECH