Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00403 ATGGATTCCATGCCTGCTGATACTTCAAATTCACATCCCATTAAAGATCCTTCTGCTTTACCTCCTGCCAAGGATCTTGAAGGGCAGACTTCTGTTTCTATAGCCTCTGGACCAGATAACTCTGCACATGAGGCATCCTCTAGACCATCTTCCCCTGGCATTTCATTATGGGGCAGAAACTTGAAAATTCCCCAGCCATTTTCTGGCTTTAATGATGACTCAACAAATGACAATGCTGGGAAGTCTCCCTTTTCACGTCTTACCAGTGGTTTAGGATTGCGAATGTCTCCAAAATCTCCGCCATCAGATGATAGTTCCAATGAAACAACTACTCAATCTAATATAATTGGGAGCATCACAAAAGGTCTGGTTGACTCTTCTCGGAATGCTGTAAAAGCTGTGCAGGTTAAGGCCCGGCACGTTGTTTCCCAGAATAAACGCAGATACCAGGAAGGAGGATTTGATCTAGATATGACATATATCACTGAAAATATTATTGCTATGGGGTTCCCCGCAGGTGACATGAGCTCTGGTTTTTTTGGTTATGTTGAAGGTTTTTACAGAAATCATATGGAAGAAGTAATTAAGTTTTTTGAGACTCATCATAAGGGCAAATACAAAGTATACAATCTTTGTTCTGAGCGGCTATATGATGCATCATTATTTGAGGGAAAGgTTGCTTCCTTCCCCTTTGATGACCACAATTGCCCACCAGTTCAACTGATTATATCATTTTGTCATAGTGCATACTCATGGTTGAAAGAAGATATTGAGAATATTGTAGTTGTCCACTGTAAGGCTGGAATGGCAAGGACAGGGTTGATGATTTCTAGTCTTCTGTTATTCTTAAAGTTCTTTCCAACTGCTGAGGAATCCATTGATTACTACAATCAGAAAAGATGTATTGATGGAAAAGGCCTTGTTCTGCCAAGTCAGATCAGGTATGTCAAATATTTTGAGCGTGCTTTGACTTACTTCAATGGAGAAAACCCACCAGCTCGCAGGTGTATGCTTAGGGGATTCCGGCTTCACAGGTGCCCATACTGGATCAGGCCTTCTATAACTGTTTCGAATCATAATGGTGTTTTGTTCTCAACCAAAAAGCATCCACGAACAAAAGATCTTTCGCCCGAAGATTTTTGGTTTACTGCACCAAAAAAAGGAGTGATGGTCTTTGCATTGCCAGGAGAGCCTGGTCTTACAGAGTTGGCTGGGGACTTCAAGATCCATTTTCATGATCGTCAAGGAGATTTTTATTGTTGGTTGAACACAACTATGACAGAAAATAGGAAAGTACTGAACACGAGTGATCTTGATGGTTTTGACAAGAGAAAATTGCCTTCCCCAGGATTCATGGTTGAGGTTGTGCTAGTGGATTATGATGGCAATGTTACAACATCCAAACCTGAAACTGTTACAAAAAAATCAGATGAGAGGTCAAGCAACACTCCTTCCCCTGTTGATGTGGGCGTCCCCGCTCCAAATGCAGACAAAGAATCAGGGAGTCGTGATAAAGATGATGTGTTTTCAGATGGTGAGGGAGAGGATACTGGTTCTTCAAGAAGCAGGCAAACAAAAGCAGCTACTGAAGCAGCTGGAACTGTTTCTAGTGTTGCGACCGGATCCGAATCGAACATaacttcaaatcaaataaaaaatttgacacatGCAACCGAACAAGTTTCTCTGGGAAGTACAGGCTCTATCCCCATTGGTAGTGCCAGTGAGCCAAAAGATgttgatgaaagaaaagggTCCAGTCTGGAAGTTCCCAGCTCAGAAAGTGAATTTAAGGCAATGGCTGCAGATGCTTCTGTTTTTACGTTTGGAGATGATGAAGATTACGAAAGTGAGTG 1856 0.4106 MDSMPADTSNSHPIKDPSALPPAKDLEGQTSVSIASGPDNSAHEASSRPSSPGISLWGRNLKIPQPFSGFNDDSTNDNAGKSPFSRLTSGLGLRMSPKSPPSDDSSNETTTQSNIIGSITKGLVDSSRNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPVQLIISFCHSAYSWLKEDIENIVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCIDGKGLVLPSQIRYVKYFERALTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSNHNGVLFSTKKHPRTKDLSPEDFWFTAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTSDLDGFDKRKLPSPGFMVEVVLVDYDGNVTTSKPETVTKKSDERSSNTPSPVDVGVPAPNADKESGSRDKDDVFSDGEGEDTGSSRSRQTKAATEAAGTVSSVATGSESNITSNQIKNLTHATEQVSLGSTGSIPIGSASEPKDVDERKGSSLEVPSSESEFKAMAADASVFTFGDDEDYESE 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00403 618 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Bva14g00403 618 MobiDBLite consensus disorder prediction 67 85 - -
Bva14g00403 618 MobiDBLite consensus disorder prediction 464 545 - -
Bva14g00403 618 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Bva14g00403 618 MobiDBLite consensus disorder prediction 1 15 - -
Bva14g00403 618 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Bva14g00403 618 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 261 300 IPR000387 GO:0016311|GO:0016791
Bva14g00403 618 SMART PTEN_C2_2 331 459 IPR014020 -
Bva14g00403 618 MobiDBLite consensus disorder prediction 1 114 - -
Bva14g00403 618 CDD PTP_PTEN 157 322 IPR045101 GO:0016791
Bva14g00403 618 MobiDBLite consensus disorder prediction 498 520 - -
Bva14g00403 618 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Bva14g00403 618 MobiDBLite consensus disorder prediction 521 545 - -
Bva14g00403 618 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Bva14g00403 618 MobiDBLite consensus disorder prediction 29 54 - -
Bva14g00403 618 MobiDBLite consensus disorder prediction 563 597 - -
Bva14g00403 618 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 23 618 - -
Bva14g00403 618 MobiDBLite consensus disorder prediction 99 114 - -
Bva14g00403 618 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 23 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00403 Bva-Chr14 1983022 1988478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00403 36 618 Protein tyrosine phosphatase (PTP) family AT3G19420 68.792 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00403 K01110 - gmx:100784003 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00403 14 1983022 1988478 Bva14g00403 14 1983022 1988478 ECH
Bva13g00325 13 1521373 1526960 Bva14g00403 14 1983022 1988478 ECH