Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00400 ATGGGTACCAAAATCGTCTCTTTCTGTACGACGTTGTTGTTTTCTGTGTTGTTGTTCCATGGGGTGGGCTTTGCCGAAGAGATAGCTCGCTCAGAAAACGAAGCATTAGCTCGCTCTGAAAGGGAAACATATGAAATTATCATAGGAGGGGGCGGGGGCTATTTTTTTGGCCCTATTCCTTCCCCTGAAGAACCTCCAGAATGTGGATGTGAACCTCCTCTTCCTCCTCCCCCTCCACCACCGTGTCCTCCTCCACCTTCACCGCCACCACCACCGTGTCCCCCTCCACCTTCCccgccaccaccaccaccgaGTCCCCCTCCAccttctcctcctcctcctccgcCGCCTAAAATAAATACCGCAATCCTGCGTGAGAAAGCGAGAAAAGCTCTTCTGAATTTCACGTTGAGCATTGAACGCAATGAGTTTACCAAAACTTGGGAGGGTGATAATGTTTGTACTTATAGAGGAGTCCGATGTGACGACTTTCCAAAGGGAGATGGAAAGGCCGTTTCGGGACTAGACTTCAACACAGCTGCGTTCAAAGGCCTTAAAAACAAACCGTTGAAGCTCTCGGGTATCTTGGACCAGATACGAGAGTTGACATTTTTCCATGTAAACTCAAACGGTTTCAGCGGCATTATCCCAAGCGAAATTGCCGAGTTCAAGTACTTCTACGAGCTAGACCTTAGCAACAACAAAATCAGTGGCGAGTTTCCACAAGCGGTGATCGATGCCAAGAAACTAGTCTTCTTAGATCTCAGGTTCAACTCTTACTACGGGACAGTTCCAAAAGAACTGTTCGAGAAGGATCTAGATGTGATTTTCCTCAACAACAATCACTTCAGCGGATATCTTCCCGACAATTTTGGCTCAACGCCAGCCAGGTATCTCACTTTCGCCAACAACTGGTTCAGCGGTCCAATCCCAAGCAGCATTGGGCAAGCTTCAAAGACCCTCACAGAGGTTCTGTTCTTGGGCAACCATTTCTGTGACTGCTTGCCATATGAAATTGGAAAACTGGAAAAGCTCACAGTTTTTGATGTGAGCAGGAACCAATTGAGGGGTCCAATTCCACACTCCTTTATCTGTTTGGACGATATCCAGTTTCTGAATTTGGCCGATAACCAATTTTCCGGCACCGTACCGGAGGTGCTTTGTACGCTTTCTGGCCTCACAAACAATGGTTTACTCGACTTAAGAAACAATTATTTCACCCAAGTTGGACCCGAATGCAAGAAGCTGATCGCATCCAGAGTGCTTAAAGTGGATAACAATTGCATTTCGGGCGAACGGAATCAGAGGACAGCTGCAAAATGTAACCAGTTCTTCACGCAGAACAGGCCCTGCCCAAATGCCAAGACCCTGAATATCGTTCCttgtaagaaaaattactACGCAACCTTCCCACAGAGACAGAGTGCTAGTCTTCCAGCAGGCGGTGCCCCCCCGGCCCCCGTCACTTACAAAACTCTCAGACCGCATCGACTCAGACTCTG 1502 0.4627 MGTKIVSFCTTLLFSVLLFHGVGFAEEIARSENEALARSERETYEIIIGGGGGYFFGPIPSPEEPPECGCEPPLPPPPPPPCPPPPSPPPPPCPPPPSPPPPPPSPPPPSPPPPPPPKINTAILREKARKALLNFTLSIERNEFTKTWEGDNVCTYRGVRCDDFPKGDGKAVSGLDFNTAAFKGLKNKPLKLSGILDQIRELTFFHVNSNGFSGIIPSEIAEFKYFYELDLSNNKISGEFPQAVIDAKKLVFLDLRFNSYYGTVPKELFEKDLDVIFLNNNHFSGYLPDNFGSTPARYLTFANNWFSGPIPSSIGQASKTLTEVLFLGNHFCDCLPYEIGKLEKLTVFDVSRNQLRGPIPHSFICLDDIQFLNLADNQFSGTVPEVLCTLSGLTNNGLLDLRNNYFTQVGPECKKLIASRVLKVDNNCISGERNQRTAAKCNQFFTQNRPCPNAKTLNIVPCKKNYYATFPQRQSASLPAGGAPPAPVTYKTLRPHRLRL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00400 500 Gene3D Ribonuclease Inhibitor 125 295 IPR032675 -
Bva14g00400 500 PRINTS Proline rich extensin signature 66 78 - -
Bva14g00400 500 PRINTS Proline rich extensin signature 100 116 - -
Bva14g00400 500 PRINTS Proline rich extensin signature 79 100 - -
Bva14g00400 500 Gene3D Ribonuclease Inhibitor 296 466 IPR032675 -
Bva14g00400 500 MobiDBLite consensus disorder prediction 55 118 - -
Bva14g00400 500 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 29 493 - -
Bva14g00400 500 PANTHER BNAC05G26270D PROTEIN 29 493 - -
Bva14g00400 500 MobiDBLite consensus disorder prediction 59 118 - -
Bva14g00400 500 SUPERFAMILY L domain-like 175 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00400 Bva-Chr14 1975904 1977757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00400 117 447 Leucine-rich Repeat extension Gene Families AT3G24480 39.339 4.55e-70 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00400 - - gmx:100795489 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00400 14 1975904 1977757 Bva14g00400 14 1975904 1977757 ECH