Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00388 ATGAcattcaaagaaaaacatcTCAATAACATTAGCAGTACCGGTACCATAGGCATCCCTTTCAATAATTTGAGaaagcaagagaagaaaaagaagcaaatggCCACTAACACagaacaacaacaacagcagcagAAAACAGAAGCCGGAAGGCACCAAGAGGTTGGGCACAAGAGCCTTCTGCAGAGTGATGCTCTGTACCAGTATATACTGGAGACCAGTGTCTACCCAAGAGAACCCGAAGCCATGAAGGAGCTCAGAGACTTAACTGCCAAGCACCCTTGgAACATCATGACAACCTCAGCAGACGAAGGCCAGTTCCTGAACATGCTCCTTAAGCTTATCAATGCCAAGAATACCATGGAAATCGGTGTCTACACTGGCTACTCCCTGCTTGCCACTGCCCTGGCTCTTCCCGAAGATGGAAAGATCTTGGCCATGGACATTAACAGAGAGAACTACGAACTGGGTTTGCCCGTGATTGAAAAAGCTGGCGTTGCACACAAAATCGATTTCAAGGAAGGTCCAGCTCTCCCTGTTCTTGATGAACTCATCGAAGACGAAAAGAATCTTGGGAGCTACGATTTCATCTTTGTGGATGCTGACAAGGACAACTACCTCAACTATCACAAGAGGCTTatcgaacttgttaaggttgGAGGTTTGATCGGGTACGATAACACCCTATGGAACGGTTCTGTGGTGGCACCCCCCGATGCTCCGCTCAGGAAGTATGTCAGGTACTACAGAGATTTCGTGTTAGAACTCAACAAGGCTCTGGCCGTAGACCCCAGGATCGAAATCTGCATGCTACCGGTTGGCGACGGAATCACTCTCTGCCGTCGGATTAAGTG 854 0.4379 MTFKEKHLNNISSTGTIGIPFNNLRKQEKKKKQMATNTEQQQQQQKTEAGRHQEVGHKSLLQSDALYQYILETSVYPREPEAMKELRDLTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIEKAGVAHKIDFKEGPALPVLDELIEDEKNLGSYDFIFVDADKDNYLNYHKRLIELVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00388 284 Pfam O-methyltransferase 72 283 IPR002935 GO:0008171
Bva14g00388 284 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 59 283 IPR002935 GO:0008171
Bva14g00388 284 Gene3D Vaccinia Virus protein VP39 58 284 IPR029063 -
Bva14g00388 284 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 42 284 - -
Bva14g00388 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 63 282 IPR029063 -
Bva14g00388 284 MobiDBLite consensus disorder prediction 1 21 - -
Bva14g00388 284 PANTHER O-METHYLTRANSFERASE-RELATED 42 284 - -
Bva14g00388 284 Coils Coil 24 44 - -
Bva14g00388 284 MobiDBLite consensus disorder prediction 1 54 - -
Bva14g00388 284 CDD AdoMet_MTases 122 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00388 Bva-Chr14 1931821 1933950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00388 1 283 Monolignol Biosynthesis Gene Families AT4G34050 77.891 1.49e-168 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00388 K00588 - gmx:100779260 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00388 14 1931821 1933950 Bva14g00388 14 1931821 1933950 ECH
Bva13g00309 13 1462146 1463562 Bva14g00388 14 1931821 1933950 ECH