Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00382 ATGATGACTACACCAAATAAATCAACATCCACAGTACCTTCAGACTCCTCGGAACAGAAGGGGAAAAATATGACCGAGCCAAATGCAAACGTAATTCAATCTCCTTTAAACCAACAACTTCGTAGCTCTTCAGATGGTCCTGTAGCTATCCTTTGGGATATTGAAAACTGTCCTGTTCCAAGTGATGTCCGCCCTGAAGATGTAGCTGGTAATATAAGAATGGCGTTGCGGGTGCATCCAGTTATTAAAGGAGCAGTTATGATGTTTTCTGCTTATGGGGATTTCAATGCCTTCCCCAGGCGGTTAAGGGAGGGCTGTCAAAGAACTGGTGTGAAACTCGTTGATGTTCCCAATGGGAGAAAGGATGCTGCTGACAAAGCCATCTTGGTTGACATGTTCTTGTTTGCCCTTGACAACCGTCCCCCTTCTTCTATCATGCTGATATCTGGAGATGTTGATTTTGCCCCAGCACTGCACATTCTCGGTCAAAGGGGATACACAGTAATTCTTGTCATCCCTTCTGGGGTAGGCGTATCATCTGCCCTTAGCAATGCTGGCAAATTTGTCTGGGACTGGCCTAGTGTGGCACGTGGTGAAGGTTTTGTGCCCCCGTCAAAGGCTTTAGTGCCACCTCGTATGGTTCCGAATGAAGTTGCTGGATATCTTATGGGGTGCCATATTAATGACAACCCAGATGGACAAAATGAAGAGGAAGCAATAGTTTATCGAGGGATCTCACAGAACTATTATAACTCCAGGGATTTCTCTGTACTATCACAATCTATATCTGAATGCAACAGTGGTACCTCTAATGTACCGTGTTTTCCAGCAACTTTTAGGTCACACAGCCTTCCATCTGGATTGACTGAGGTTTCAGGAGGACTTGTATCTTCAAGTGACCACAACGAATGCCCATCGTGGGTACAGCCTGGAGATTTAAATGGCCTTAAGGGCCAGCTGGTCAGGTTACTTGAACTTTTTGGAGGATGCCTACCTCTGACCCAAGTTCCAGCGGAGTACCTGAAACTATTTGGAAGGCCTCTGTATTTATCTGAATATGGGGCATTCAAACTCGTACAACTTTTCAAGAAAATGGGTGATACCATGGCTGTAGAAGGGAAAGGGCATCGAAAATTTGTCTATCTTAGAAACTGGAAAGCGGGGCCAAGTGCCCCCCCTTTGGCCCTggcaagaaaagagaagaaaggaaaggggGGTCAGGATGAGAATGCAGATATTGTCAATGGCGGTTGTTCTTCGGATGAGTTCTCAGATGAGGAAAGAGTAGTCATTGAAGAGCATGATGAGCAAAGTAGCACAGGAAAGGGTCATCATGGAAGAGCAGCTAGATATGACGTTGAGCAGTTCAAGCACGAGCTGCAAGAGATTCTAGTTAGCTATTCATGTCGAATATTTTTAGGTTGTTTTGAGGCAATATACCAGCAGCGGTACAAGAAGCCACTGGAATACCGGAGATTTGGTGTGGACAAGTTGGAGGATTTGATTGAGAAAGCGAGAGATGTGGTAATATTGCATGAAGAACCGGGAAGCAAGAGGAAGTTCCTAGCTGCTGTTGGTGGGTA 1583 0.4466 MMTTPNKSTSTVPSDSSEQKGKNMTEPNANVIQSPLNQQLRSSSDGPVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFAPALHILGQRGYTVILVIPSGVGVSSALSNAGKFVWDWPSVARGEGFVPPSKALVPPRMVPNEVAGYLMGCHINDNPDGQNEEEAIVYRGISQNYYNSRDFSVLSQSISECNSGTSNVPCFPATFRSHSLPSGLTEVSGGLVSSSDHNECPSWVQPGDLNGLKGQLVRLLELFGGCLPLTQVPAEYLKLFGRPLYLSEYGAFKLVQLFKKMGDTMAVEGKGHRKFVYLRNWKAGPSAPPLALARKEKKGKGGQDENADIVNGGCSSDEFSDEERVVIEEHDEQSSTGKGHHGRAARYDVEQFKHELQEILVSYSCRIFLGCFEAIYQQRYKKPLEYRRFGVDKLEDLIEKARDVVILHEEPGSKRKFLAAVGG 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00382 527 Gene3D - 40 193 - -
Bva14g00382 527 Pfam OST-HTH/LOTUS domain 454 517 IPR025605 -
Bva14g00382 527 Pfam OST-HTH/LOTUS domain 315 380 IPR025605 -
Bva14g00382 527 ProSiteProfiles OST-type HTH domain profile. 312 384 IPR025605 -
Bva14g00382 527 CDD PIN_limkain_b1_N_like 47 173 - -
Bva14g00382 527 PANTHER LIMKAIN B LKAP 5 522 IPR024768 GO:0005777|GO:0010468|GO:1903231
Bva14g00382 527 Pfam NYN domain 47 186 IPR021139 GO:0004540
Bva14g00382 527 CDD LOTUS 313 382 - -
Bva14g00382 527 Gene3D - 312 381 IPR041966 -
Bva14g00382 527 Gene3D - 451 521 IPR041966 -
Bva14g00382 527 MobiDBLite consensus disorder prediction 1 28 - -
Bva14g00382 527 ProSiteProfiles OST-type HTH domain profile. 452 526 IPR025605 -
Bva14g00382 527 CDD LOTUS 453 516 - -
Bva14g00382 527 PANTHER - 5 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00382 Bva-Chr14 1895867 1898593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00382 48 198 C2H2 Transcription Factor Family AT5G61190 42.384 7.99e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00382 - - gmx:100818186 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00382 14 1895867 1898593 Bva14g00382 14 1895867 1898593 ECH