Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00373 ATGTCCTCCTCCTCTTCCAAGAGAGCAAGAGTCGCTGCAACTCAACCCACCCTCAACTTCTCCGCTCCACCTCAACGCCTCACAAGCGAGCAAGAATTCTCCGTCATGGTCGCTGCACTCACCAACGTTGTTGCCGGTTCCACCACCTTCTCCTCCACCTCTGAGTTTACCAACGAATTTCGTTTCCCGCAGACATCTGAGTATGCCACCGCGAGTATGGGAACCAGCTTCAATTACGGGGACCAACTGGTGCGGGCTGCTGCTAATATCGAAACCTGCCACGATTGCAAAATCGATGGGTGCTTAGGCTGCAAGTTTTTCCCGGACGAGAAGAAGAACCATGGCGGGAACAAGCAGCAGAAGAGGAACAAGAAGAAGTACAGGGGAGTGAGACAGAGGCCGTGGGGGAAATGGGCTGCGGAGATCCGAGACCCGAGAAGGGCAACCCGGGTCTGGTTGGGGACCTTCATTACTGCAGAGGAAGCCGCAAGAGCTTACGACAAAGCCGCAATCGAGTTCCGCGGGCCCCGTGCGAAGCTCAATTTTCCATTTCCCGATAACTCGTTGATGAGTTCGCAAGCAGGGGAGACAGCTGACGAGCCACTAATGGTAGCAGAGCAGGGAATAATGGGGAATTACGGTAGTACCTCGACGCAAATGGAAACTGTGGGGACTGGGAATAAGGAAAATGAATTCTGGGAAGGGATTGGGGAAGATGATTTTCATCagctgatgatgatgatgatggacTTCAACGGGGATTCCTCAGATTCTGCTACAGGGAACACTCTGAGCTCGtg 800 0.5175 MSSSSSKRARVAATQPTLNFSAPPQRLTSEQEFSVMVAALTNVVAGSTTFSSTSEFTNEFRFPQTSEYATASMGTSFNYGDQLVRAAANIETCHDCKIDGCLGCKFFPDEKKNHGGNKQQKRNKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFITAEEAARAYDKAAIEFRGPRAKLNFPFPDNSLMSSQAGETADEPLMVAEQGIMGNYGSTSTQMETVGTGNKENEFWEGIGEDDFHQLMMMMMDFNGDSSDSATGNTLSS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00373 266 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 22 261 - -
Bva14g00373 266 CDD AP2 127 183 IPR001471 GO:0003700|GO:0006355
Bva14g00373 266 SUPERFAMILY DNA-binding domain 126 184 IPR016177 GO:0003677
Bva14g00373 266 SMART rav1_2 126 189 IPR001471 GO:0003700|GO:0006355
Bva14g00373 266 Pfam AP2 domain 126 175 IPR001471 GO:0003700|GO:0006355
Bva14g00373 266 Gene3D AP2/ERF domain 125 184 IPR036955 GO:0003700|GO:0006355
Bva14g00373 266 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 261 - -
Bva14g00373 266 ProSiteProfiles AP2/ERF domain profile. 126 183 IPR001471 GO:0003700|GO:0006355
Bva14g00373 266 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Bva14g00373 266 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00373 Bva-Chr14 1846283 1847245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00373 25 265 AP2-EREBP Transcription Factor Family AT4G34410 40.364 3.97e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva14g00373 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00373 - - ccaj:109799734 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00373 14 1846283 1847245 Bva14g00373 14 1846283 1847245 ECH
Bva13g00292 13 1368819 1369832 Bva14g00373 14 1846283 1847245 ECH