Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00366 ATGGAAGACGAAGACGAAATTGTCCAATGCTCTTCTGATTCCACCGACTCCGGTGACGAATATAGTGGCGAACGTGAAGACGACCTCGATGTAGACGAGCAATCGGAGGCCGAATCTTCTTCTCCGCCCGATGACGCGCGGAAATTGCAAAATGTCGATGCTCTTGTGAGAGGCAACCTTATAGTCAAGCGACAATCGTTGCTTCCACGAGTTCTTTCAGTAACGGAAGGAGCAGCTGTTTGTAGAAAACCCTTTAAACCTCCCTGCTCCAATGGTTACAATGGTCGAAATGAAGAACTTGCTCGTCGCCTTTGGGCCCGGAAAAAGTTTGTCCCGTGGGGATCTTCAAAGCCAGTATTGGTTCCAATTACCAACCGGTTGAATGTAGGAGTAACTGTTGAAAAAGATGTTGCTGAGGAGAAAATATCTTTGCCACCTGGTATTGATCCTCTAGTGTTGTGGCAGCCAGAAGACTGTGAGGATGGGGCTCCCAATTTGGCGCCAATAGCAGTCGACCCATTGCTTGTTCGTTTCCTGCGACCGCATCAGAGAGAAGGGGTTCAGTTTATGTTTGAATGTGTCTTGAGTCTTTGTGGCGCAGCAAATATACACGGATGCATCCTGGCAGATGATATGGGTTTGGGGAAGACATTGCAGTCAATCACGTTACTGTATACTCTTCTTTGTCAAGGCTTTGATGGGAAGCCAATGGTTAGAAAAGCCATCATTGTGACTCCTACCAGCCTTGTAAGCAATTGGGAAGCGGAAATCAAAAAGTGGGTCGGAGAAAGAGTTCAACTTATTGCTCTATGTGAAAGCACCAGAGATGATGTCGTCTCTGGGGTTGACAATTTTACAAGTCCTCACAGTTCTATACAGGTGCTAATTGTTTCGTATGAGACGTTTCGAATGCATTCATCAAAATTCAGCCACAGTGGATCTTGTGACCTACTTATTTGTGACGAGGCTCACAGGCTGAAAAATGATCAGACAATAACAAACAGGGCATTGGCTGCTCTCCCATGCAAGCGTAGAATTTTGTTGTCAGGAACTCCTTTGCAGAATGACCTAGAAGAATTCTTTGCGATGGTTAACTTTACCAACCCCGGAATTTTGGGTGATGTTACACATTTTCGCCGTTATTATCAGGCTCCGATAATTTGTGGAAGAGAACCTACTGCCACTGCAGAAGAGAAGAAGCTTGGTGCTGAACGCTCTGCTGAGTTAAGTGGACAAGTCAACCAGTTTATCCTTAGAAGGACTAATGCACTATTATCGAATCACTTGCCACCAAAGATTGTTGAAGTTGTTTGCTGCAAGTTGACTCCATTACAGTCAGAtctatataaacattttatacAATCCAAAAATGTTAAACGGGTGATTTCTGAAGTAAAGCAATCAAAGATTTTGGCTTACATAACGGCTCTTAAAAAGTTGTGCAATCATCCTAAGCTTATCTATGACACTATCAGAAGTGGGAGTCCAGGAACTACAGGTTTTGAGAACTGCATTCGCTTCTTCCCGCCAGAGATGTTATCTGgaagATCTGGCTTATGGACAGGGGGAGATGGAGCTTGGGTTGAGCTGTCAGGGAAAATGCATGTCTTAGCAAGATTACTTGGCCATTTGCGTCAGAGGACAAATGACCGCATTGTCCTTGTCTCAAACTATACTCAGACTCTGGATCTTTTTGCTCAATTGTGTCGAGAAAGAAGGTACCCACACTTGAGGCTTGATGGCAGTACATCAATCAGTAAGAGACAGAAGTTGGTCAACCGCTTTAATGACCCATCTAAGGACgagtttgtttttctcttaagCAGCAAGGCTGGTGGTTGTGGCCTCAATTTGATTGGTGGAAATCGACTAATCTTGTTTGATCCCGATTGGAATCCTGCAAATGATAAACAAGCCGCAGCAAGAGTGTGGCGGGatggacaaaagaaaagagtttacATTTATAGATTTTTGAGTGCTGGAACAATTGAAGAAAAGGTCTACCAGCGTCAGATGTCAAAAGAAGGGCTACAGAAAGTCATTCAGCAGGAGCAAACAGATAGCCTCGTGACAAAGGGTAACTTCCTCTCAACGGAGGATCTTCGTGATCTGTTCACATTTCATGAAAATCTCAAGTCagatattcatgaaaaaatgCGGTGCACTAGGTGCCAAACATACGATGATGAGCCTGAAAGCAATGACTGGAAATACGCAGACCAGTCAACACCTAACAGTGAATCTGATAAAGAATCCGCTGATATTGGTGGATTTGCAGAAATTGCAGGCTGCTTACAGAAGTTAAAAAGATCAGAAATGCAGGTCGGGACCCCGTTGGAAGAAGATTTAGGTAATTGGGGCCATCATTTCTTCCCATCATCCGTGCCGGATGCTATCCTTCAGGCTTCAGCCGGAGATGAGGTGACCTTTGTTTTTACAAATCAAGTAAACGGAAAGCTGGCACCCGTTGAGTCGCTGGTTAGTCCACAGTTACAGCAAGGGGAACCAGATCAGGAGCTACCTAACTCAAAgataaatttcaaacaaaaacgCATTCTTTCCCCTTTACATCAGAAACCACCACTGCAGTCTACTTCTGGTGGTATTGCTATTGCACCATCTTCCTCTCTCAAGCCTTCAATAAGAGCAGCATTGAGTTCTGTCAGAATTAACAAAAACAGTTCAACACATCCAGAATCAAAGACAAAAACCTCTCTTGTAAATCAATTGCCACAAAAAAGACCACGTCCTGCTGATGTCAATGATGATGATTTCGAGTA 2780 0.4284 MEDEDEIVQCSSDSTDSGDEYSGEREDDLDVDEQSEAESSSPPDDARKLQNVDALVRGNLIVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYNGRNEELARRLWARKKFVPWGSSKPVLVPITNRLNVGVTVEKDVAEEKISLPPGIDPLVLWQPEDCEDGAPNLAPIAVDPLLVRFLRPHQREGVQFMFECVLSLCGAANIHGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVQLIALCESTRDDVVSGVDNFTSPHSSIQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTITNRALAALPCKRRILLSGTPLQNDLEEFFAMVNFTNPGILGDVTHFRRYYQAPIICGREPTATAEEKKLGAERSAELSGQVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQSDLYKHFIQSKNVKRVISEVKQSKILAYITALKKLCNHPKLIYDTIRSGSPGTTGFENCIRFFPPEMLSGRSGLWTGGDGAWVELSGKMHVLARLLGHLRQRTNDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGSTSISKRQKLVNRFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLILFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQQEQTDSLVTKGNFLSTEDLRDLFTFHENLKSDIHEKMRCTRCQTYDDEPESNDWKYADQSTPNSESDKESADIGGFAEIAGCLQKLKRSEMQVGTPLEEDLGNWGHHFFPSSVPDAILQASAGDEVTFVFTNQVNGKLAPVESLVSPQLQQGEPDQELPNSKINFKQKRILSPLHQKPPLQSTSGGIAIAPSSSLKPSIRAALSSVRINKNSSTHPESKTKTSLVNQLPQKRPRPADVNDDDFE 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00366 926 Pfam SNF2-related domain 183 487 IPR000330 GO:0005524|GO:0140658
Bva14g00366 926 MobiDBLite consensus disorder prediction 888 926 - -
Bva14g00366 926 MobiDBLite consensus disorder prediction 1 47 - -
Bva14g00366 926 MobiDBLite consensus disorder prediction 727 753 - -
Bva14g00366 926 CDD SF2_C_SNF 530 658 - -
Bva14g00366 926 CDD DEXHc_RAD54 179 420 - -
Bva14g00366 926 Gene3D - 420 728 IPR027417 -
Bva14g00366 926 PANTHER DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED 49 808 - -
Bva14g00366 926 SMART ultradead3 175 378 IPR014001 -
Bva14g00366 926 MobiDBLite consensus disorder prediction 20 39 - -
Bva14g00366 926 PANTHER SNF2/RAD54 FAMILY MEMBER 49 808 - -
Bva14g00366 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 424 725 IPR027417 -
Bva14g00366 926 SMART helicmild6 563 647 IPR001650 -
Bva14g00366 926 Pfam Helicase conserved C-terminal domain 537 646 IPR001650 -
Bva14g00366 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 420 IPR027417 -
Bva14g00366 926 Gene3D - 442 710 - -
Bva14g00366 926 MobiDBLite consensus disorder prediction 888 911 - -
Bva14g00366 926 Gene3D - 157 419 IPR038718 -
Bva14g00366 926 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 536 694 IPR001650 -
Bva14g00366 926 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 197 370 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00366 Bva-Chr14 1820481 1828036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00366 205 667 RAD5 or RAD16-like Gene Family AT3G16600 25.235 9.39e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bva14g00366 SNF2_N 2.1e-53 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00366 K10875 - jre:108988898 1404.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00366 14 1820481 1828036 Bva14g00366 14 1820481 1828036 ECH