Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00355 ATGGCTCAGCCTACAAGTAACGGTAATGCCGATCTGAATCAGCATCAGCATCAGCATCAGCACCAGCAGCAATGGACGCAGCCGCAGCACTATCAGCAACAATGGATGGCCATGCAGTATCCGGCTGCAGCCATGGCTATGATGCAGCAACAAATGATGATGTATCCGCAGCATTACATGCCTTATGTCCACCATTATCAGCCGCCTCACCAGCAGCTGAAGTCGTCGCCGCCGCCGCATCAGCAGTACCAGCAGAAACAGGGTTCCACCGATGAGATCAGGACGATCTGGCTCGGTGACCTTCATCATTGGATGGATGAGAACTATCTCCATAGTTGTTTTGCTCACACAGGCGAGGTTGTATCAGTCAAGGTTATCCGAAATAAGCAAACCGGTCAGTCAGAGGGATATGGATTTGTTGAGTTTTATTCCCGCGCAACAGCGGAAAAAAATTTGCAGAGCTTTAATGGTACAATGATGCCAAATACCGATCAGCCATTTCGTTTAAATTGGGCTACATTCAGTGCTGGTGATAGGAGATCTGATTCTAATTCTGATCTCTCTATATTTGTGGGCGACCTGGCCATAGATGTTACTGATGCTATGCTGCAGGAAACCTTTGCTAGCAGATATTCATCTGTTAAGGGGGCAAAAGTTGTCATTGATTCAAACACTGGCCGTTCAAAAGGTTATGGTTTTGTTAGGTTTGGTGATGAAAATGAGAGGACAAGGGCAATGACTGAAATGAATGGTATTTATTGTTCAAGTAGGCCTATGCGAATAGGTGTTGCAACGCCCAAGAAATCATATGGATATCAACAACAATATTCATCACAAGctgTTGTGTTAGCCGGTGGACATTCATCTAATGGTGCTATGGCCCAAGGTTCCCAGTCTGATGGGGAATTTAGTAACACAACTATATTTGTTGGGGGGCTCGATTCTGACGTCAGTGATGAAGATCTCAGACAACCATTTTTGCAATTTGGTGAAGTTGTTTCTGTAAAAATACCAGTGGGTAAAGGGTGTGGTTTTGTTCAATTTGCTGACAGAAAAAATGCTGAGGAAGCAATTCAGGGACTGAATGGGACAGTAATTGGGAAGCAGACAGTGCGTCTTTCCTGGGGTCGCACACCTGGAAATAAGCATTGGAGGGCGGATTCTAATAACCAGTGGAACGGAAACCATTATGGAGCGCAGGGTTATGGAAGCCATGGCTATGCTGTGAGGCAGAATCATGATGTAAATATgcatgctgctgctgctgctacAGTTCAAGGGGCTTCCTA 1289 0.4453 MAQPTSNGNADLNQHQHQHQHQQQWTQPQHYQQQWMAMQYPAAAMAMMQQQMMMYPQHYMPYVHHYQPPHQQLKSSPPPHQQYQQKQGSTDEIRTIWLGDLHHWMDENYLHSCFAHTGEVVSVKVIRNKQTGQSEGYGFVEFYSRATAEKNLQSFNGTMMPNTDQPFRLNWATFSAGDRRSDSNSDLSIFVGDLAIDVTDAMLQETFASRYSSVKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKSYGYQQQYSSQAVVLAGGHSSNGAMAQGSQSDGEFSNTTIFVGGLDSDVSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTVIGKQTVRLSWGRTPGNKHWRADSNNQWNGNHYGAQGYGSHGYAVRQNHDVNMHAAAAATVQGAS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00355 429 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 22 423 - -
Bva14g00355 429 MobiDBLite consensus disorder prediction 68 89 - -
Bva14g00355 429 SUPERFAMILY RNA-binding domain, RBD 174 289 IPR035979 GO:0003676
Bva14g00355 429 CDD RRM3_NGR1_NAM8_like 305 376 - -
Bva14g00355 429 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 94 174 IPR000504 GO:0003723
Bva14g00355 429 Gene3D - 285 412 IPR012677 -
Bva14g00355 429 Gene3D - 175 280 IPR012677 -
Bva14g00355 429 SUPERFAMILY RNA-binding domain, RBD 298 406 IPR035979 GO:0003676
Bva14g00355 429 PANTHER POLYADENYLATE-BINDING PROTEIN RBP47B 22 423 - -
Bva14g00355 429 SMART rrm1_1 307 374 IPR000504 GO:0003723
Bva14g00355 429 SMART rrm1_1 95 170 IPR000504 GO:0003723
Bva14g00355 429 SMART rrm1_1 188 262 IPR000504 GO:0003723
Bva14g00355 429 MobiDBLite consensus disorder prediction 1 27 - -
Bva14g00355 429 Gene3D - 93 173 IPR012677 -
Bva14g00355 429 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 187 266 IPR000504 GO:0003723
Bva14g00355 429 SUPERFAMILY RNA-binding domain, RBD 62 176 IPR035979 GO:0003676
Bva14g00355 429 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 308 371 IPR000504 GO:0003723
Bva14g00355 429 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 189 259 IPR000504 GO:0003723
Bva14g00355 429 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 96 163 IPR000504 GO:0003723
Bva14g00355 429 CDD RRM2_SECp43_like 186 265 - -
Bva14g00355 429 CDD RRM1_SECp43_like 95 175 - -
Bva14g00355 429 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 306 378 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00355 Bva-Chr14 1758505 1763009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00355 96 385 Eukaryotic Initiation Factors Gene Family AT4G34110 29.153 9.61e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00355 - - gmx:100798089 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00355 14 1758505 1763009 Bva14g00355 14 1758505 1763009 ECH