Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00345 ATGGGTTCGGTTCCAGCTGAACTGAGCTTGGATATAAGACCTACTTTTCTTCCCAAAACGATTAGTAATTTTCTCCATGAGGTCTCTACGATCGGAAATGCCGCCGAGAAATTTTTGCGGCTGGATGATTACGTTAAGAGATTGGAAGAGGAAATGAGGAAGATCGACGCTTTTAAGCGCGAGCTTCCTCTTTGCATGCTCATTATGAATGATGCAATTTCAGCTCTGAAAGATGAGTCAGCAAAATGGAGGATTCCCAATTCTCAGCCAGTATTGAAAGAATTTATCCCGCTGAAAAAAGAATGTGaccagaaagagaaaattgaaaatgaaaaggaatgtAGAGACAAGAAGAATTGGATGAGTTCAGTTCAGCTTTGTAACACTGCCGTTTATCCCCCTAAAGCTAATAGTAACTACGAGCAAAAACAACATTTCAAAGTAGAAAACAAGAAAACAGAAGGAGAATCTGTAGAAGACCCATTCCAACCTCGTAGAAACATAGATAGAAATGGAGGGTTTATGCGTTTTGCATATTCTGCTTTGCCAGTAACAACGACCAAGGATGAGAAAGAAGACTCTGGGCTTTCTCTCTTAACTCCTAGTATTAAGAATGCCAATACAAGAGAGGGATCTGGTTCAAGTGGATCCAGAACCAGCTCTAGTTCTGTCTCTCCTCCCAGTGTCCAAGCAAATCTACGTACTGGGCCACAGCAGCAGAGTTCTCGTAAACAGAGAAGATGCTGGTCACCGGAGTTGCACCGTCGATTTATCAATGCACTGCAGCAACTTGGAGGTTCTCAAgCAGCGACTCCAAAGCAAATTAGAGAACTCATGCAGGTTGACGGTCTTACTAATGATGAAGTAAAAAGTCATTTACAGAAATACCGACTCCATACTCGGAGAGTTCCTTCTGCTACAGCTACACCTGCACCTGCAAATCAGTCATCTGTTGTTGTTCTTGGAGGTTTGTTGATGTCCCAAGATCAATATAATGACTCCATCAGGACTACGAGTTCCCAGTCTGGTTCTCCTCAAGGGCCCCTCCAGTTAGCTAGATCTGCCAGAGGGTGGTCTCAAACTGAGGGTGACAAAatggaagatgatgaagaagatgaaaaatccGAAAGCTATGGCTGGAAAAATCACCTTCACAAACCTGGAAGAGTTGATGTATA 1178 0.41 MGSVPAELSLDIRPTFLPKTISNFLHEVSTIGNAAEKFLRLDDYVKRLEEEMRKIDAFKRELPLCMLIMNDAISALKDESAKWRIPNSQPVLKEFIPLKKECDQKEKIENEKECRDKKNWMSSVQLCNTAVYPPKANSNYEQKQHFKVENKKTEGESVEDPFQPRRNIDRNGGFMRFAYSALPVTTTKDEKEDSGLSLLTPSIKNANTREGSGSSGSRTSSSSVSPPSVQANLRTGPQQQSSRKQRRCWSPELHRRFINALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPSATATPAPANQSSVVVLGGLLMSQDQYNDSIRTTSSQSGSPQGPLQLARSARGWSQTEGDKMEDDEEDEKSESYGWKNHLHKPGRVDV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00345 392 Coils Coil 41 61 - -
Bva14g00345 392 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 241 301 IPR017930 -
Bva14g00345 392 SUPERFAMILY Homeodomain-like 242 302 IPR009057 -
Bva14g00345 392 MobiDBLite consensus disorder prediction 186 249 - -
Bva14g00345 392 Gene3D - 243 301 - -
Bva14g00345 392 MobiDBLite consensus disorder prediction 198 246 - -
Bva14g00345 392 MobiDBLite consensus disorder prediction 375 392 - -
Bva14g00345 392 MobiDBLite consensus disorder prediction 334 392 - -
Bva14g00345 392 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 385 IPR044787 GO:0003700|GO:0006355
Bva14g00345 392 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 244 299 IPR006447 GO:0003677
Bva14g00345 392 MobiDBLite consensus disorder prediction 145 170 - -
Bva14g00345 392 MobiDBLite consensus disorder prediction 334 357 - -
Bva14g00345 392 Pfam Myb-like DNA-binding domain 246 297 IPR001005 -
Bva14g00345 392 PANTHER TRANSCRIPTION FACTOR HHO6 7 385 - -
Bva14g00345 392 MobiDBLite consensus disorder prediction 145 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00345 Bva-Chr14 1712428 1715490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00345 6 345 G2-like Transcription Factor Family AT2G03500 37.853 6.53e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva14g00345 Myb_DNA-binding 4.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00345 - - rcn:112174025 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00345 14 1712428 1715490 Bva14g00345 14 1712428 1715490 ECH