Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00331 ATGATGGATTTCGAGAATGACAAGCCTTCCTTCTTCGTGATCGTCCGAGAACAAGAGCACAAGTCACTCAACCTTGAACGCATGAAAATCCCACAGAAGTTTGTCCCTTATGTGGATAAAAATTTGTCAAGTGATGCTATTCTTGCGGGTCCTTGTGGTCACCATTGGCAAGTCAGCGTCTGTAAGAAAGGACATGACATATATATGGTACGAGGTTGGGAGGAATTTCTGAGAGACAATTTGGTGAAGGATGGTGGGCTCTTGGTTATCACATATGAAGGAGGGACACAATTCAGTGTGCAATTTTTTAGTACCAGTGGACTTGAGAGGCTATTCTTTACCGAGAAAACAGACTCAGAAGCTGCTGTTCCAGGACTTGCAAGGAAAAGAGGCAgaccaagaaaattttctgctCAAGCTGAACCGCCTATCCGAAATGAAGGTTCAATTCCTAAAGCTAAAGGTTCCTTCTCAAAGCATCATAGTTCAACTGAGGTGGACATATG 506 0.419 MMDFENDKPSFFVIVREQEHKSLNLERMKIPQKFVPYVDKNLSSDAILAGPCGHHWQVSVCKKGHDIYMVRGWEEFLRDNLVKDGGLLVITYEGGTQFSVQFFSTSGLERLFFTEKTDSEAAVPGLARKRGRPRKFSAQAEPPIRNEGSIPKAKGSFSKHHSSTEVDI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00331 168 ProSiteProfiles B3 DNA-binding domain profile. 13 106 IPR003340 GO:0003677
Bva14g00331 168 SMART B3_2 14 106 IPR003340 GO:0003677
Bva14g00331 168 Pfam B3 DNA binding domain 20 105 IPR003340 GO:0003677
Bva14g00331 168 MobiDBLite consensus disorder prediction 123 168 - -
Bva14g00331 168 Gene3D - 3 107 IPR015300 -
Bva14g00331 168 CDD B3_DNA 9 104 IPR003340 GO:0003677
Bva14g00331 168 SUPERFAMILY DNA-binding pseudobarrel domain 7 106 IPR015300 -
Bva14g00331 168 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0625400-RELATED 7 123 - -
Bva14g00331 168 PANTHER B3 DOMAIN-CONTAINING 7 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00331 Bva-Chr14 1646904 1648290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00331 22 109 B3 DNA Binding Superfamily AT3G18990 35.227 1.27e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva14g00331 B3 1.3e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00331 - - cam:101507121 101.679