Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00330 ATGATGGATTTCGAGAATGACAAGCCTTCCTTCTTCGTGATCGTCCGAGAACAAGAGCACAAGTCACTCAACCTTGAACGCATGAAAATCCCACAGAAGTTTGTCCCTTATGTGGATAAAAATTTGTCAAGTGATGCTAGTCTTACGGGTCCTTGTGGTCACCATTGGCAAGTCAGCGTCTGTAAGAAAGGACATGACATATATATGGTACGAGGTTGGGAGGAATTTCTGAGAGACAATTTGGTGAAGGATGGTGGGCTCTTGGTTATCACATATGAAGGAGAGACACAATTCAGTGTGCAATTTTTTAGTAGCAGTGGACTTGAGAGGCTATTCTTTCCCGAGAAAACAGACTCAGAAGCTGCTGTTCCAGGACTTGCAAGGAAAAGAGGCAgaccaagaaaattttctgctCAAGCTGAACCGCCTATCCGAAATGAAGGTTCAATTCCTAAAGCTAAAGGTTCCTTCTCAAAGCGTCATAGTTCAACTGAGGTGGACATATCAGAGGCTCATCACAAAATGGCAGCATCATTTTCATCTAAAAGTCCTTATTTCAAGAAGTTAATGCAAAAATCATACGTGGTAAAGACATTTCTGATGCCCGTCCCTGCTGACTTCGGCAGAAAGCAACTTCCTCAACACAACAAAACGATCATCATCCTGCagaatttagaagaaaaatcttGGGAAGTGAGTTTCCTTCCTGGTAAAACTCCTGTTTTATCCAAAGGATGGGCAAACTTTGCACGTGATAATGGGCTCGGGGTTGGTGAAATTTGCATATTTGAACTAGTAGCCAGAAACCAAATGAGGGTCCACATATTCCGATGTTA 836 0.4103 MMDFENDKPSFFVIVREQEHKSLNLERMKIPQKFVPYVDKNLSSDASLTGPCGHHWQVSVCKKGHDIYMVRGWEEFLRDNLVKDGGLLVITYEGETQFSVQFFSSSGLERLFFPEKTDSEAAVPGLARKRGRPRKFSAQAEPPIRNEGSIPKAKGSFSKRHSSTEVDISEAHHKMAASFSSKSPYFKKLMQKSYVVKTFLMPVPADFGRKQLPQHNKTIIILQNLEEKSWEVSFLPGKTPVLSKGWANFARDNGLGVGEICIFELVARNQMRVHIFRC 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00330 278 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 25 154 IPR044837 -
Bva14g00330 278 CDD B3_DNA 184 277 IPR003340 GO:0003677
Bva14g00330 278 SUPERFAMILY DNA-binding pseudobarrel domain 179 277 IPR015300 -
Bva14g00330 278 Pfam B3 DNA binding domain 20 105 IPR003340 GO:0003677
Bva14g00330 278 Pfam B3 DNA binding domain 186 277 IPR003340 GO:0003677
Bva14g00330 278 Gene3D - 3 107 IPR015300 -
Bva14g00330 278 SMART B3_2 14 106 IPR003340 GO:0003677
Bva14g00330 278 SMART B3_2 186 278 IPR003340 GO:0003677
Bva14g00330 278 ProSiteProfiles B3 DNA-binding domain profile. 13 106 IPR003340 GO:0003677
Bva14g00330 278 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0723500 25 154 - -
Bva14g00330 278 Gene3D - 165 278 IPR015300 -
Bva14g00330 278 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 173 277 IPR044837 -
Bva14g00330 278 SUPERFAMILY DNA-binding pseudobarrel domain 7 106 IPR015300 -
Bva14g00330 278 MobiDBLite consensus disorder prediction 129 157 - -
Bva14g00330 278 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0723500 173 277 - -
Bva14g00330 278 CDD B3_DNA 9 104 IPR003340 GO:0003677
Bva14g00330 278 ProSiteProfiles B3 DNA-binding domain profile. 186 278 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00330 Bva-Chr14 1638336 1643084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00330 22 277 B3 DNA Binding Superfamily AT3G18990 26.444 1.99e-24 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva14g00330 B3 3.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00330 - - qsu:111986925 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00330 14 1638336 1643084 Bva14g00330 14 1638336 1643084 ECH