Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00329 ATGCTGCGCCCTTGTTTCCACAAACTTATTGTTCCTTCGACGGTCCAAGCCAGGCAACTGAGGATTCCAGATAATTTTCTGAGAAAATCAGGGGGTGACCTTTCTACAATTGCTTCCTTCATTGTTCCTGACGGCAGTGTTTGGCGTGTAGGATTAAAAAAAGCAGACAACAAGTTTTGGTTCCATGATGGTTGGCAGGAATTTGCGCAACGCTACTCGATTGGCGTTGGGTACTTTTTAGTGTTCCGGTATGAAGGGAATTCATCTttcaaagttaatattttaaatttggctACTTCTGAGATAAACTATCAATCAGCCACGCGAAGCAACAATAATGAAGGTTCATACTTTGCCAATCAACATAgtatttttgatgaaattgaagATGAAGACTCCTTGGAAACGTTGGATTCATCACTCTCTTGCCGTACTCCTGGTGCATTGCAAAACAAGGCTTTTGCTGGATCTGTAGGGCAATTGACACCTGGCAAGAATTATACTCCTCCAGCATTACAGAATTTGTTTAATGGGTCTAAACTTAATTCCATAAACTGGGGAGATGGTGGGAATGTGCTTTCTTCTAAGGGTGCCAATTCAATAGAGACTCGCTCTACCCGAGATATAGGTGTTCAGTTTAATGCAATCGAGTTTAAAAGGTCTACTGAAGAATTGAAATTGCATAATTCTAATGACGAAGcgcaaaaatctaaaaaaagaaagaggcgAAAATCTGATCCTAATGATGAGGAATCTTCTGCCCAGAACGAAGAGGAAGCGGAAATGCGCTTTAGATTTTATGAAAGTGCTTCTGCAAGAAAGAGAACCGTTACagcagaagaaagagaaaaggcaATTAATGCAGCAAAAGCATTTGAGCCACCTAATCCTTTTTGTAGGGTTGTCTTGCGaccttcctatttatatagGGGATGCATAATGTATTTGCCATCTTGCTTTGCCGAGAAGCATTTGAATGGGGTTTCCGGATTCATCAAACTTCAGATTGCTGATGGAAGACAGTGGCCTGTTCGCTGCCTTTATAGAAGTGGTAGAGCAAAGTTAAGCCAAGGGTGGTTTGAATTCGCATTAGAGAACAATTTAGGGGAAGGTGATGTCTGTGTGTTTGAGCTGCTTGTAATGAAGGAGGTAGTGCTGAAAGTTAATGCATTCCGTGTTGCTGAGGATGCAGGATTGTTGAACCCTCCTTTGCAGCAAAATCTCAGCCCAACTAAACTGTTGATGAACACTGCCATACGCCAAAATGTCAGCCCAACTAAACTGTTGAATGCTCCCTTGCAGCAAACTGTTAGCCCTGCTAAACCAGTTAGAAACTATTG 1340 0.3896 MLRPCFHKLIVPSTVQARQLRIPDNFLRKSGGDLSTIASFIVPDGSVWRVGLKKADNKFWFHDGWQEFAQRYSIGVGYFLVFRYEGNSSFKVNILNLATSEINYQSATRSNNNEGSYFANQHSIFDEIEDEDSLETLDSSLSCRTPGALQNKAFAGSVGQLTPGKNYTPPALQNLFNGSKLNSINWGDGGNVLSSKGANSIETRSTRDIGVQFNAIEFKRSTEELKLHNSNDEAQKSKKRKRRKSDPNDEESSAQNEEEAEMRFRFYESASARKRTVTAEEREKAINAAKAFEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQIADGRQWPVRCLYRSGRAKLSQGWFEFALENNLGEGDVCVFELLVMKEVVLKVNAFRVAEDAGLLNPPLQQNLSPTKLLMNTAIRQNVSPTKLLNAPLQQTVSPAKPVRNY 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00329 446 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Bva14g00329 446 PANTHER B3 DOMAIN-CONTAINING 1 421 - -
Bva14g00329 446 Gene3D - 276 396 IPR015300 -
Bva14g00329 446 MobiDBLite consensus disorder prediction 224 259 - -
Bva14g00329 446 CDD B3_DNA 297 392 IPR003340 GO:0003677
Bva14g00329 446 ProSiteProfiles B3 DNA-binding domain profile. 299 394 IPR003340 GO:0003677
Bva14g00329 446 Pfam B3 DNA binding domain 6 94 IPR003340 GO:0003677
Bva14g00329 446 Pfam B3 DNA binding domain 302 392 IPR003340 GO:0003677
Bva14g00329 446 SMART B3_2 299 394 IPR003340 GO:0003677
Bva14g00329 446 SMART B3_2 6 98 IPR003340 GO:0003677
Bva14g00329 446 MobiDBLite consensus disorder prediction 243 259 - -
Bva14g00329 446 Gene3D - 2 98 IPR015300 -
Bva14g00329 446 PANTHER B3 DOMAIN TRANSCRIPTION FACTOR VRN1-LIKE PROTEIN 1 421 - -
Bva14g00329 446 CDD B3_DNA 4 96 IPR003340 GO:0003677
Bva14g00329 446 SUPERFAMILY DNA-binding pseudobarrel domain 292 392 IPR015300 -
Bva14g00329 446 SUPERFAMILY DNA-binding pseudobarrel domain 4 96 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00329 Bva-Chr14 1634000 1637065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00329 1 398 B3 DNA Binding Superfamily AT3G18990 50.374 4.55e-130 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva14g00329 B3 8.5e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00329 - - gmx:100813285 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00329 14 1634000 1637065 Bva14g00329 14 1634000 1637065 ECH