Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00314 ATGATGATAATGGTTCCGTCTCAGCCGCCGTCGCAGCAGTGGGGCccatctccttctccttctccttctccttctttatCTCCTACCGTCTCTCCCGCTGCTTGGGTCAACCGGCCATCATCGACGCCCAAGTCGCCGGTTGACTTCAGCCCTCCCTTGATTGCAATGGTGGTTGTTGTTGCCACCGCTTTCCTCGTCGTTACCTATTCCCGCCTCATCTCCCGCCACCTCGTGCCTCCGATTCTTCAACTGTTTCGTCGGTGGCGCCGCCGTCGAAGGCGCTCCTACCTCCCGTCCTCATCCGGGGACCTGGACTCCCTCCCTTACGACTCGCCTTTCGAGGCAATGGATGGGCCTCACGTCTTCTCCCCTTACGGCCTGGACGAATCTGTGATCAAGACCATTCCGTTTTCTCTCTACACCACCAAATCAAATGGTAGATTTGAAGAGTCCCGTCGTGATTGCGCCGTGTGTTTATTGGAATTCGAAGACGATGACTATGTCCGCACGCTACCTGTTTGTTCGCACACTTTTCACGTTGATTGCATCGATGTTTGGCTCAGGTCCCACGCCAACTGTCCTCTTTGCCGTGCCGGAGTATTATGTGCTGAATCTCCATTCATGCCCATGATGGCGGCAAGGATTCGACCCAGTTTCGATGACGACACTATGTTGCACAGAATCAATATGGACCCTCTGATTGAAGCTCCGATGCCCATATCTCAATCACTGGTACCGGAGATCATACCGTGTACCGAGGACCAATCGCCCCGAAGGAACAATGGGAATCCAGACGACCGCTTAAACGGTCGCGATTTTCTGCTGAAGAGGTCCTATTCGTTCGGATTCGAACGGAGCTTAGCGTCTGAGAGAATGGTGATGGAACCAGCGACAGCATCTCCGTGGAGATACCGGAGAGGAAGTAGCAGTTTCTGGAGCAAACGGCCATCGCCGTTTGGGTCTTTGGGCAAGTCCAGAGTGTTTTCATTCAGATACTACAGGGGAATGAAATCGCCTTTCTTCCGGCGAAGGGGGTTCTTCCCATTATCGGAGTCGAGCATGAGGTACGCCGGCGCGGGAGGCGGGAGCTCATCGCGGCGAAGCAAGTCAATAGCAAGCCCCATGTTTCCGAGGTCATCGGCTCTGTCAGCAGCGGCTTTCTCGTCGAGCCGGCTCAGATGTGGCGATCCCGAGGCCTTACTTTCACCGGATAGGTTTAACCGCAGatg 1229 0.5338 MMIMVPSQPPSQQWGPSPSPSPSPSLSPTVSPAAWVNRPSSTPKSPVDFSPPLIAMVVVVATAFLVVTYSRLISRHLVPPILQLFRRWRRRRRRSYLPSSSGDLDSLPYDSPFEAMDGPHVFSPYGLDESVIKTIPFSLYTTKSNGRFEESRRDCAVCLLEFEDDDYVRTLPVCSHTFHVDCIDVWLRSHANCPLCRAGVLCAESPFMPMMAARIRPSFDDDTMLHRINMDPLIEAPMPISQSLVPEIIPCTEDQSPRRNNGNPDDRLNGRDFLLKRSYSFGFERSLASERMVMEPATASPWRYRRGSSSFWSKRPSPFGSLGKSRVFSFRYYRGMKSPFFRRRGFFPLSESSMRYAGAGGGSSSRRSKSIASPMFPRSSALSAAAFSSSRLRCGDPEALLSPDRFNRR 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00314 409 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 16 382 - -
Bva14g00314 409 SUPERFAMILY RING/U-box 143 202 - -
Bva14g00314 409 CDD RING-H2_PA-TM-RING 154 197 - -
Bva14g00314 409 ProSiteProfiles Zinc finger RING-type profile. 155 197 IPR001841 -
Bva14g00314 409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 201 IPR013083 -
Bva14g00314 409 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 16 382 IPR044675 -
Bva14g00314 409 Pfam Ring finger domain 154 197 IPR001841 -
Bva14g00314 409 MobiDBLite consensus disorder prediction 11 27 - -
Bva14g00314 409 MobiDBLite consensus disorder prediction 387 409 - -
Bva14g00314 409 MobiDBLite consensus disorder prediction 1 34 - -
Bva14g00314 409 SMART ring_2 155 196 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00314 Bva-Chr14 1587193 1589262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00314 46 409 C3H Transcription Factor Family AT3G18930 53.061 4.44e-96 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00314 - K19041 gmx:100806115 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00314 14 1587193 1589262 Bva14g00314 14 1587193 1589262 ECH