Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00305 ATGGAGGACGACTATTTCAGCAGCGACGACGATTATCAATGCTCCGATCAGGAGTCCATGGAGGACTTTGAGGAGCCCGATTTTAAGTTGGTCACTGCAAAGGGTCCCACAACTCAGGTGATTACAAAGGAATCACTTCTAGTTGCACAgAAAGAAGATTTGCGTAAAGTGATGGACATGCTATCAGTAAGAGAGCACCACGCACGTACGCTTCTTATTTATCATCGTTGGGACGTGGAGAAGCTGTTTTCCGTTTATGTAGATAGGGGCAAAGCTTTCTTGTTTGCTGAAGCCGGTGTCACTGTGGATGAACATCGGGCTTCTGATTCATCCTTGTCTTCTTCGATAATGTGTGATATCTGCATGGAGGATGTTCCTAGTGATGAATCAACAAGAATGGACTGTGGTCACTGTTTTTGCAACAATTGTTGGACAGAACATTTTATTGTCAAGATAAATGAGGGTCAGAGTAAACGCATTAGGTGTATGGCACATAAATGTAATGCTATTTGTGATGAAGCTGTCGTGAGAACTCTAGTCAGTAAGAAGCAACCCGATATGGCAGAGAAATTTGAACGCTTTCTACTTGAATCCTACATTGAAGATAATAAGAGAGTCAAATGGTGTCCAAGCACTCCACATTGTGGGAATGCAATACGTATTGAGGATGATCAGTTATGTGAGGTAGAATGTTCATGTGGTTTGCAGTTTTGTTTCAGTTGCTTATCAGAAGCACACTCCCCTTGTTCTTGTTTGATGTGGGAGCTTTGGGCTAAGAAGTGTCGAGATGAATCGGAGACTGTTAATTGGATGACAGTTCATACTAAACCTTGTCCAAAGTGCCACAAACCTGTGGAGAAGAACGGCGGTTGCAACTTGGTTAGCTGCATCTGTGGTCAAGCATTTTGTTGGCATTGTGGTGGAGCCACTGGCAGAGAGCATACTTGGACAAGTATAGCTAATCATAGCTGTGGTCGCTATAAAGAAGACCAGGAGAAAAAGTCTGAGCGGGCCAAGCGGGATCTTTATCGGTATATGCACTATCATAACCGTTATAAAGCTCACACGGATTCCTTCAAGCTTGAAAGTAAATTGAAAGAGACCATACAAGAAAAGGTTGCTATTTCTGAAGGGAAGGATTCTAAGGTCAGAGATTACAGCTGGGTAAATAATGGACTCGGCAGACTTTTCAGGTCAAGGCGTATTCTATCGTATTCGTACGCGTTTGCGTTTTATATGTTTGGAGATGAGCTGTTTAAGGATGAAAtgacagaaaaggaaagggaaataaAGCAGCACTTATTTGAGGATCAGCAGCAGCAGCTTGAGTCAAATGTTGAAAGGCTTTCCAAAATTTTGGAGGAGCCCTTTGATCAGTTTGCAGATAGTAAGATTATGGAGATAAGGATGCAAGTTATCAATGCGTCAGTAATTATTGACAATCTTTGTCAGAAAATGTACGAGTGCATCGAGAATGATTTGTTGGGTTGTCTCCAACTTGGCACCCACAGTATAGCTCCATACAAGTCAAAGGGCATAGAGAGGGCATCAGAACTTCAAGTGTGTTGGACCAATAAAGCCAATGATACCGGTGGAACAGAAGAAGTTGATCGGCCATCTGGGTCTGGGAGTTCAGATGAAAGTGGATACCCTTCTCGTAAGCGTGCTAGAAAGGATGATATTGGAGTTGGCCTTTTTGATCTAAACTTGCCAGCAGCAGAGGTTGTAGACAGAAATTA 1739 0.4215 MEDDYFSSDDDYQCSDQESMEDFEEPDFKLVTAKGPTTQVITKESLLVAQKEDLRKVMDMLSVREHHARTLLIYHRWDVEKLFSVYVDRGKAFLFAEAGVTVDEHRASDSSLSSSIMCDICMEDVPSDESTRMDCGHCFCNNCWTEHFIVKINEGQSKRIRCMAHKCNAICDEAVVRTLVSKKQPDMAEKFERFLLESYIEDNKRVKWCPSTPHCGNAIRIEDDQLCEVECSCGLQFCFSCLSEAHSPCSCLMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWHCGGATGREHTWTSIANHSCGRYKEDQEKKSERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETIQEKVAISEGKDSKVRDYSWVNNGLGRLFRSRRILSYSYAFAFYMFGDELFKDEMTEKEREIKQHLFEDQQQQLESNVERLSKILEEPFDQFADSKIMEIRMQVINASVIIDNLCQKMYECIENDLLGCLQLGTHSIAPYKSKGIERASELQVCWTNKANDTGGTEEVDRPSGSGSSDESGYPSRKRARKDDIGVGLFDLNLPAAEVVDRN 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00305 579 Gene3D - 247 495 - -
Bva14g00305 579 ProSiteProfiles Zinc finger RING-type profile. 118 166 IPR001841 -
Bva14g00305 579 ProSiteProfiles TRIAD supradomain profile. 114 328 IPR044066 -
Bva14g00305 579 Pfam IBR domain, a half RING-finger domain 189 251 IPR002867 -
Bva14g00305 579 SMART ibrneu5 189 251 IPR002867 -
Bva14g00305 579 SMART ibrneu5 259 324 IPR002867 -
Bva14g00305 579 MobiDBLite consensus disorder prediction 527 556 - -
Bva14g00305 579 SUPERFAMILY RING/U-box 259 317 - -
Bva14g00305 579 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 204 IPR013083 -
Bva14g00305 579 MobiDBLite consensus disorder prediction 527 549 - -
Bva14g00305 579 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 6 513 IPR031127 GO:0004842|GO:0016567
Bva14g00305 579 Pfam Ariadne domain 328 579 IPR045840 -
Bva14g00305 579 SUPERFAMILY RING/U-box 114 201 - -
Bva14g00305 579 SUPERFAMILY RING/U-box 189 257 - -
Bva14g00305 579 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 6 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00305 Bva-Chr14 1559251 1563199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00305 58 548 ARIADNE family AT2G16090 72.267 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00305 K11968 - gmx:100783343 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00305 14 1559251 1563199 Bva14g00305 14 1559251 1563199 ECH