Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00271 ATGACGACTTCCGGCAATATTCTTTCTGAATCCACTGTTCTGGGTTTGAAACTCTATATCGTTATAGGTGCTTTCATTTTAATCGTGGTAGTTATTGTGATTCTGATTATTATCTGCATTCGCCGGAATCAGAGATCGAAGAAGCGTAAAGTGCCCGTCAAGCACGGCTCTGGCATTATTCCATTGGTTTGCAAGGAGATCGTGGAGGTTAAAGCCTTGGATCTCGCTCGAGATTGTGAGCAAACAGagcttgaaattgaaaatgtcggtccgaagaagaagaaagaggcgGCAGAGGTTAAAGTTGATATCgaaagaagaggaaagagTAGCGGTGGAGAGAGTGACGTGTCCGGTGGGAGCCGCAGTGACGTGTCGGTGGATGCTCCGAACATAGGGTGGGGACGTTGGTATAGCTTGAAAGAGCTGGAGCTTGCGACGCATGAGTTCACTGATCAGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTACAGAGGAGTTCTACCGGACGGGTCTGTGGTGGCTGTGAAGAATCTTCTAAACAACAAGGGTCAAGCGGAGAAGGAGTTTAAGGTAGAGGTTGAAGCAATTGGAAAAGTAAGGCATAAGAATTTGGTGGGTTTAGTTGGATATTGTGCTGAAGGTGCTCAAAGAATGCTTGTGTATGAATATGTTGACAATGGAAATTTGGAGCAGTGGTTGCATGGTGATGTAGGCCCTGTGAGCCCCTTGACATGGGAAATACGAATGAGGATTGCCATTGGGACCGCAAAAGGGCTTGCTTATTTGCATGAAGGCTTAGAACCCAAAGTCGTGCACCGAGATGTAAAATCCAGTAACATTCTTTTGGACAGAAAGTGGAATGCCAAAGTATCAGACTTTGGACTGGCCAAGCTCTTGGGACCTGAGAAAAGCTACGTGACTACACGTGTAATGGGGACATTTGGATATGTTTCTCCTGAGTATGCAAGCACAGGTATGCTTAACGAGGGCAGTGATGTGTATAGCTTTGGAATTTTACTCATGGAGATAATTACAGGAAGAAGTCCCATTGATTATTCTAGGGCACCGGGAGAGATGAACTTGGTTGATTGGTTTAAGGCAATGGTAGGAAGTCGTCGCGGCGATGAACTTGTAGATCCTTTAATTGAGATCCCTCCCTCTCCAAGATCTTTAAAGCGAGCCTTACTGGTTTGTCTGCGCTGTATAGATTTGGACGTCAGCAAGCGACCAAAGATGGGTCAGATTGTTCATATGCTCGAGGCAGATGATTTCCCATTTCGATCTGAACTTCGTACGGTAAGAGAGAAAGATAATAGTCCTTCTCAATCAGATGTTTCCGGTAAAGTTTCATATCCCCCAAAGCATTTGGGATCATG 1382 0.4342 MTTSGNILSESTVLGLKLYIVIGAFILIVVVIVILIIICIRRNQRSKKRKVPVKHGSGIIPLVCKEIVEVKALDLARDCEQTELEIENVGPKKKKEAAEVKVDIERRGKSSGGESDVSGGSRSDVSVDAPNIGWGRWYSLKELELATHEFTDQNVIGEGGYGIVYRGVLPDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGAQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWEIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWNAKVSDFGLAKLLGPEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMEIITGRSPIDYSRAPGEMNLVDWFKAMVGSRRGDELVDPLIEIPPSPRSLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSELRTVREKDNSPSQSDVSGKVSYPPKHLGS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00271 460 ProSiteProfiles Protein kinase domain profile. 150 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00271 460 PIRSF TyrPK_CSF1-R 3 49 - -
Bva14g00271 460 PIRSF TyrPK_CSF1-R 171 240 - -
Bva14g00271 460 PIRSF TyrPK_CSF1-R 240 447 - -
Bva14g00271 460 ProSitePatterns Protein kinases ATP-binding region signature. 156 178 IPR017441 GO:0005524
Bva14g00271 460 SUPERFAMILY Protein kinase-like (PK-like) 124 422 IPR011009 -
Bva14g00271 460 Gene3D Phosphorylase Kinase; domain 1 128 225 - -
Bva14g00271 460 PANTHER OS01G0323000 PROTEIN 9 438 - -
Bva14g00271 460 MobiDBLite consensus disorder prediction 432 460 - -
Bva14g00271 460 SMART serkin_6 150 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00271 460 CDD STKc_IRAK 156 422 - -
Bva14g00271 460 Pfam Protein kinase domain 151 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00271 460 PANTHER OS03G0227900 PROTEIN 9 438 - -
Bva14g00271 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Bva14g00271 460 Gene3D Transferase(Phosphotransferase) domain 1 226 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00271 Bva-Chr14 1393754 1396804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00271 20 424 Trihelix Transcription Factor Family AT1G70460 40.000 1.63e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bva14g00271 Pkinase 2.7e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00271 14 1393754 1396804 Bva14g00271 14 1393754 1396804 ECH
Bva13g00201 13 971488 975102 Bva14g00271 14 1393754 1396804 ECH