Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00264 ATGTCTACCTCTGAAGTTGAGTTCCGATGCTTTGTCGGTGGGCTCGCATGGGCCACCGACAACGATGCTCTCCAGAACGCCTTCTCTCCATACGGTGAAATCATCGAATCGAAGATTATCAACGATCGTGAGACCGGAAGGTCAAGAGGTTTTGGATTCGTTACCTTCGCTTCAGAGCAGGCTATGAGGGATGCCATCGATGGCATGAATGGCAAGGAGCTCGATGGCCGTAATATTACCGTTAATGAGGCTCAGACCCGTGGAAGGAGCGGCGGCGGAGGCGGTGGATACGGAGGCGGCGGCGGCGGATACAGCCGTGGTGGAGGTGGATACGGCGGTGGCGGCCGTCGTGAAGGTGGATACAACCGCAATGGTGGTGGATACGGTGGAGGCGGGGGTGGATACGGTGGAGGCGGTGGTGGTTATGGGGGTGGATATGGTAGCCGTGACCGTGGTGGTTACGGAGATGGTGGATCTCGCTACTCTAGGGGTGGTGGTGCTTCTGATGGAAGTTGGAAAAATTA 524 0.5668 MSTSEVEFRCFVGGLAWATDNDALQNAFSPYGEIIESKIINDRETGRSRGFGFVTFASEQAMRDAIDGMNGKELDGRNITVNEAQTRGRSGGGGGGYGGGGGGYSRGGGGYGGGGRREGGYNRNGGGYGGGGGGYGGGGGGYGGGYGSRDRGGYGDGGSRYSRGGGASDGSWKN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00264 174 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Bva14g00264 174 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Bva14g00264 174 PANTHER GEO13361P1-RELATED 1 174 - -
Bva14g00264 174 MobiDBLite consensus disorder prediction 139 174 - -
Bva14g00264 174 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 174 - -
Bva14g00264 174 SUPERFAMILY RNA-binding domain, RBD 8 116 IPR035979 GO:0003676
Bva14g00264 174 SMART rrm1_1 9 82 IPR000504 GO:0003723
Bva14g00264 174 MobiDBLite consensus disorder prediction 69 100 - -
Bva14g00264 174 Gene3D - 2 105 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00264 Bva-Chr14 1359634 1360943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00264 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 34.177 2.67e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00264 - K13195 pavi:110770159 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00264 14 1359634 1360943 Bva14g00264 14 1359634 1360943 ECH