Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00239 ATGGCTTCCTCAAGTGGAACATCTTCAGGTTCATCCTTGGTTCAAAACTCGGGTTCGGAGTCCGATTTGCAGGTCCTTATGGatcagaggaagaggaagaggatgaTATCTAATCGTGAATCTGCAAGAAGATCTCGgatgagaaaacaaaagcatttGGATGATCTGGTGGCTCAAGTGGCTGAGctcagaaaagaaaaccagCAAATACTCACAAGCGTTAACATCACCACACAACAGTATTTGAGCGTTGAGGCTGAAAATTCAGTGCTTAGAGCTCAAGCGGGTGAGCTTAGCCACAGATTGCAGTCTCTGAACGAGATCATTGATTCCTTGAATGCTAGCAATGGCGTTTTTGGAGTTGCAGGGGCATCATCAAGCACCTTCATCAATGAGCCCTCCAATAGCTTCTTCAACCCGTTCAACATGGCTTATCTGAACCAACCGATTATGGCTTCTGCAGATTTCTTGCATTGCTG 479 0.4029 MASSSGTSSGSSLVQNSGSESDLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAELRKENQQILTSVNITTQQYLSVEAENSVLRAQAGELSHRLQSLNEIIDSLNASNGVFGVAGASSSTFINEPSNSFFNPFNMAYLNQPIMASADFLHC 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00239 159 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Bva14g00239 159 Pfam bZIP transcription factor 30 77 IPR004827 GO:0003700|GO:0006355
Bva14g00239 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Bva14g00239 159 PANTHER BZIP TRANSCRIPTION FACTOR 1 156 - -
Bva14g00239 159 MobiDBLite consensus disorder prediction 1 50 - -
Bva14g00239 159 MobiDBLite consensus disorder prediction 1 24 - -
Bva14g00239 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 156 - -
Bva14g00239 159 Gene3D - 28 83 - -
Bva14g00239 159 Coils Coil 46 73 - -
Bva14g00239 159 MobiDBLite consensus disorder prediction 25 50 - -
Bva14g00239 159 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Bva14g00239 159 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Bva14g00239 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00239 Bva-Chr14 1253377 1254841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00239 26 157 bZIP Transcription Factor Family AT4G34590 62.963 2.05e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva14g00239 bZIP_1 4.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00239 K25786 - gmx:100101862 225.713