Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00230 ATGGCAACTTATTACTCTAGTTCAAGCAATCAAAGAGATTCTACATCTATGTTCTGTCTAAGGGAACCTTTGCCTAATTCATATCCCGAGACACCAATTCTTCCTAGTAATATGACATTGTATATGAACTCAGGGTCATATTCAGATTCAATGTCTGAAAATTCTCAGCAACAAAATAACTGCTTTGCGATTCCATCGATAGGTGCATCACATTCAACTCCTGCACAGCAAGAAATATTAGCAAACCTAGGTGGATTACAAAGTAGGGAACATGATTTCACTGCATGGAGAGAGGGAAGAAATGAGATGCTAGTTACACATTCAGTGGATGGACAGAACTTGCAGGGTCAGGGATTATCTCTAAGTCTTGGAACCCAAATACCATCAGGAATCCAAATCCCTTCTATCCATGATCGGAATCCTAATCCGAGTTTTGATTCATATTTGGGTTCTAATCCATCAATTTCAGGTGATGGGGGCTATAAAAGTGGGTCATCTAGGGATGATGAACGTTTGAGACACTCTGAAACTTTTCCTCCTGGTTTTCCTGAAGGCAATCAAGAATTGCACAGGGATGATTTTTCAATGCGTGGAATGCCAATTGTTACGAGAATGATTCCTAATTCCAAATACCTGAAGGTAGCACAACAACTGCTTGATGAAGTTGTTGACATCGGGAAAGCTGTAAAACAACCTGATGTGAAAAGTCATAGAACAAATGAGGACTCTAAAAAGAGTTCCAAGGGGGATGATGGGAgactagaaaatgaaaaggcaCCTGCTGAAGGAGTGACTAATCATCAAGACTCAGCTAATAACTCTTCTTTTGAGCTTTCACATGCTGAAAAACAAGATCTGCAGAACAAGCTAACCAAACTTCTGTCAATGTTGGATGAGGTCGACAGTAGGTACAAACAATATTATCATCAGATGCAAATTGTGGTATCATCATTTGATGTGGTAGCAGGACGTGGTGCAGCTAAACCATACACAGCACTTGCTCTTCAAACCATTTCTCGCCATTTCCGGTGCTTGCGCTATGCAATCACTGGCCAAATCAGTGCAACGCAGAATAACCTCGGAGAGCAAGATGCTTGGGGAAATAATAAAGGAGTTAGAATATCAAGACTTAAGTATGTGGACCAACAAATCCGGCAACAGAGGGCTCTTCAGCAGCTTGGTATAATGCAGCATGCATGGAGGCCACAGAGGGGGCTTCCAGAAAGCTCTGTTTCTATTCTTCGCGCTTGGCTGTTCGAGCATTTCCTTCATCCCTATCCAAAGGATTCTGATAAGATCATGCTAGCTAGGCAGACAGGCTTGACTAGAAGTCAGGTTTCAAATTGGTTTATAAATGCCCGAGTGCGTCTATGGAAACCTATGATCGAGGAAATGTACAAGGAAGAGATTGGTGATGCTGACATGGACTCCAGTTGTTCATCTGAAAATGCATCCAAAGTAACAAAAAGTGATATGAAGACCACAAATGATATGGGTGATGATTTGCAGCAAAGTCAAAGCTCAATGGCCAATATGAATTGCAATGATGAAGAAGCAAAGGACTTCGGATCAGATCATGTTCTTGGTACAGAAATCGCAGGATCTTCTGGACTAGCTGAAGAGCAAAGGCCAAATTTTGACGATTGTGGTCTCTACCCTGACGGCACAGTTGTTCAGACGAGTGGATGCAGTCAAAGGTATATGGCAGTTGCTGCTACATGCCAAGTGTCAGAGATGGGAAGGTTTGAGACAGGAAGTGGAGTATCTCTCACATTAGGTTTGCAGCATTGCGAGGGTGGTAATAGTTTTGTTGCCATGAGGGAGGATGACGTCTACAATTCTGCTGCAGCTTCTTCGCTACGAGCTGAGACAGCAGAACTTGATTGTATCACAAATGGGAACCAGCAGCAAAGGTTCTCGTCATCCCATTTATTACGTGATTTTGTAGTGTA 1952 0.4201 MATYYSSSSNQRDSTSMFCLREPLPNSYPETPILPSNMTLYMNSGSYSDSMSENSQQQNNCFAIPSIGASHSTPAQQEILANLGGLQSREHDFTAWREGRNEMLVTHSVDGQNLQGQGLSLSLGTQIPSGIQIPSIHDRNPNPSFDSYLGSNPSISGDGGYKSGSSRDDERLRHSETFPPGFPEGNQELHRDDFSMRGMPIVTRMIPNSKYLKVAQQLLDEVVDIGKAVKQPDVKSHRTNEDSKKSSKGDDGRLENEKAPAEGVTNHQDSANNSSFELSHAEKQDLQNKLTKLLSMLDEVDSRYKQYYHQMQIVVSSFDVVAGRGAAKPYTALALQTISRHFRCLRYAITGQISATQNNLGEQDAWGNNKGVRISRLKYVDQQIRQQRALQQLGIMQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEEIGDADMDSSCSSENASKVTKSDMKTTNDMGDDLQQSQSSMANMNCNDEEAKDFGSDHVLGTEIAGSSGLAEEQRPNFDDCGLYPDGTVVQTSGCSQRYMAVAATCQVSEMGRFETGSGVSLTLGLQHCEGGNSFVAMREDDVYNSAAASSLRAETAELDCITNGNQQQRFSSSHLLRDFVV 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00230 650 ProSiteProfiles 'Homeobox' domain profile. 397 460 IPR001356 GO:0003677
Bva14g00230 650 MobiDBLite consensus disorder prediction 232 282 - -
Bva14g00230 650 SMART HOX_1 400 464 IPR001356 GO:0003677
Bva14g00230 650 Coils Coil 283 303 - -
Bva14g00230 650 Pfam Homeobox KN domain 417 456 IPR008422 GO:0003677|GO:0006355
Bva14g00230 650 MobiDBLite consensus disorder prediction 232 262 - -
Bva14g00230 650 Gene3D - 396 474 - -
Bva14g00230 650 SUPERFAMILY Homeodomain-like 401 467 IPR009057 -
Bva14g00230 650 SMART prehox3 202 351 IPR006563 -
Bva14g00230 650 MobiDBLite consensus disorder prediction 132 161 - -
Bva14g00230 650 MobiDBLite consensus disorder prediction 132 191 - -
Bva14g00230 650 MobiDBLite consensus disorder prediction 163 177 - -
Bva14g00230 650 Pfam Associated with HOX 206 350 IPR006563 -
Bva14g00230 650 MobiDBLite consensus disorder prediction 476 497 - -
Bva14g00230 650 MobiDBLite consensus disorder prediction 473 497 - -
Bva14g00230 650 MobiDBLite consensus disorder prediction 263 281 - -
Bva14g00230 650 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 56 611 - -
Bva14g00230 650 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 56 611 - -
Bva14g00230 650 CDD homeodomain 400 461 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00230 Bva-Chr14 1200199 1204398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00230 27 650 Homeobox Transcription Factor Family AT4G34610 43.526 4.56e-140 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bva14g00230 POX 1.3e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00230 - - gmx:100801522 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00230 14 1200199 1204398 Bva14g00230 14 1200199 1204398 ECH