Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00204 ATGGCAATTGGACGAACGGGAGTATTCGTCGACGACTATTTGGAGTACGCGAGCACGTTGCCTGCTGAGCTTCAGAGGCTTCTCAATACCATCCGTGAACTCGACGAGCGATCTCAGtCTATGATAAACCAGACCAGGCAACGGACAAAGTACTGTATGGGCTTGTCATCGCACAGCTCTAAGAAAGGTAATCGTTATAGTAGCCTTAACTATAATAACCATAACACcaatgaagaagatgatgctGGAGTTGAGAAAATGCGAAAAGAAATCGATGCAAATCAGGATAGTGCATTAAGTCTGTGTACTGAGAAGGTTTTGCTGGCCAGGCAAGCATATGACTTGATAGATAGCCATGTAAAAAGACTGGATGAagacttgaccaacttcgctGAAGATCTAAAACAAGAGGGAAAAATATCACCAGATGAGCCAGCAATTCTCCCACCATTACCTATAGTCCCTAAAAGTGAAAAACGCAGGCCCTTGTATGTAACACCACAATCGAAGAGACTTGATTACAGGGATAGAGATTGGGATCGCGAACGTGAAAGGGATTTTGAGCTCATGCCCCCGCCGGGAAGCCAAAAAAAGGAGTATGCAACTCCCTTGGATGTTGATCAACCCATTGATCCAAACGAACCTACATATTGTGTTTGTCATCAGGTGTCTTTTGGGGATATGATTGCGTGTGACAATGAAAATTGCGAAGGAGGCGAATGGTTCCACTATTCATGTGTTGGCCTAACACCGGAGACAAGATTCAAGGGAAAATGGTATTGTCCAACCTGTAGATCAGCACcacaaaatcaatg 815 0.4172 MAIGRTGVFVDDYLEYASTLPAELQRLLNTIRELDERSQSMINQTRQRTKYCMGLSSHSSKKGNRYSSLNYNNHNTNEEDDAGVEKMRKEIDANQDSALSLCTEKVLLARQAYDLIDSHVKRLDEDLTNFAEDLKQEGKISPDEPAILPPLPIVPKSEKRRPLYVTPQSKRLDYRDRDWDRERERDFELMPPPGSQKKEYATPLDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCEGGEWFHYSCVGLTPETRFKGKWYCPTCRSAPQNQ 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00204 271 SUPERFAMILY FYVE/PHD zinc finger 193 265 IPR011011 -
Bva14g00204 271 Pfam PHD-finger 217 266 IPR019787 -
Bva14g00204 271 PANTHER PHD FINGER PROTEIN ING2 2 267 - -
Bva14g00204 271 SMART ING_2 9 130 IPR024610 -
Bva14g00204 271 SMART PHD_3 217 265 IPR001965 -
Bva14g00204 271 Coils Coil 24 44 - -
Bva14g00204 271 PANTHER INHIBITOR OF GROWTH PROTEIN 2 267 IPR028651 -
Bva14g00204 271 Gene3D - 5 128 - -
Bva14g00204 271 MobiDBLite consensus disorder prediction 55 79 - -
Bva14g00204 271 CDD ING_plant 17 127 - -
Bva14g00204 271 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 130 IPR024610 -
Bva14g00204 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 267 IPR013083 -
Bva14g00204 271 MobiDBLite consensus disorder prediction 55 77 - -
Bva14g00204 271 CDD PHD_ING 217 264 - -
Bva14g00204 271 ProSiteProfiles Zinc finger PHD-type profile. 215 267 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00204 Bva-Chr14 1039784 1043206 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bva14g00204 ING 1.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00204 K11346 - gmx:100787916 474.937