Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00176 ATGTCGTTTTCTTGTAACAAAAGCTTCTTCCAGAGGTTCTGCGTGGATGAGTTCCAAATGGGAAGTTATGCTCATAGCAGCTTTTTGTCTAATGATCTTCTGCCTTCTCTTGGAGCCCGAATCAACCAGGGAACCAGACTTCGAAGACACATAATCTCCCCCTTCAATCCCCGTTATAGGGCTTGGGAGTTGTTCCTGGTTGTTCTAGTCATTTACTCAGCTTGGATTTGCCCGTTTGAGTTTGCCTTTCTTCCTTACAAGCAAGACACGCTTTTCATCATCGACAACATTGTCAATGGTTTCTTTGCCATCGACATCATCCTTACGTTCTTTGTTGCATATTTAGATAGCCATTCTTACCGTCTTATTGATGAACCCAATAAAATTGCAATCAGGTATATATCAACCTGGTTTATTTTTGATGTCTGCTCAACTGCACCATTTCAGCCCATTAGCATCCTCTTTACCAACCATAGCAGTGAGCTTGGCTTTAAACTGCTTAACATGCTCAGATTGTGGCGTCTGAGACGAGTTAGCTCTCTGTTTGCAAGaCTTGAGAAGGATATCCGCTTCAATTATTTCTGGATTAGATGCACAAAGCTTATTGCTGTAACCTTGTTTGCAGTACACTGTGCTGGATGCTTTTACTATCTGATTGCAGATAGATACCCTGATCCTGAGAAGACCTGGATTGGCGCAGTGTATCcaaatttcaaagatgcaAGCCTTTGGGAGCGATATGTGACTGCATTATATTGGTCCATTGTTACACTTACGACTACTGGCTATGGCGATTTACACGCCGAAAACCCGAGAGAGATGTTGTTTGATATCTTCTACATGCTGTTCAACCTGGGATTAACGTCTTACATCATTGGAAACATGACGAACCTTGTAGTCCACTGGACCAGCCGCACCAGAAATTTCAGAGATACAGTAAGAGCAGCTTCAGAATTTGCATCAAGAAATCAATTGCCCCATCGCATACAAGATCAAATATTGTCGCACTTATGTTTGAGGTTTAAAACAGAAGGATTGAAGCAGCAAGAAACATTAAATGGTCTGCCCAAGGCAATTCGTTCAAGTATTGCATACCATCTCTTCTTTCCCGTTGTGCAGAAGGTTTACCTCTTCCATGGAGTTTCCCAAGACTTCCTTTTCCCACTGGTTTCAGAAATGGAAGCTGAGTATTTTCCACCCAGGGAGGATGTGATATTGCAAAACGAGTCTCCTACAGATCTTTATGTGGTGGTTTCAGGGGCAGTGGATTTTATTGGCAATGTTGATGGGCAAAATCAAGTTATAGGGAAGGCCGGTGCAGGAGATACATTTGGAGAGATTGGGGTTTTGTACCATAGACCACAGCCTTTCACAGTTCGGACCACGGAGCTTTCTCAAATTCTAAGACTGAACAGAACTTCATTAATGAATGCCATACAAGCAAGTGCTGAAGATGCAGAAATCATAATGGATAATCTTTTCACGAGACTGAAGGGAAAAGAGGGTTTGGATCTGGAATATCCAGAACAAGATCCTGCATCGCCTTATGGAGGAACAAGAGAAAGCTTTTCCAATGCATGCGCAAATAATTCACAGGAAGGAAGGTGCGGAAATTTCCGAGACTCGGAGTCTAGATTGTTTAAGGTGACAAGCAATGATCATTTCATTACCAAATCTGAGGACGGCCAAAGAGATCTTCATGCTACAGCGAATAGAGGGAATCCAGAGATGGTTGAAATTCTACTCGAAAGAGATGCAAATGCAAAGAATCCAAATACAATAGGCTGGACACCAAAAGCTCTAGTGGAGAATCAAGGAAACAGCACCATTCCTGACCCCTTTATGAGttgtgaaaaaggaaagaaaccgGATGAACATAGAATAGAGTTTACGGAGCCAGAAATCCTTGACCATGCTATAAACGAGCCAACCAGATACAGAAAACAAGATGGTTCCCGGTCTATTAACTTCCCATTAGAAAACGCATGCACAAACTACCGCTCAAGTACTTATAACTGTTCGAATGATAGAGAAGCCGCAAGATGCATCAAGAAGAGAGTTACGATCCACTTGCCATGTGAATACAGAAATACCTCAGAAAGACAGCACGGGAAGTTGATAATCCTACCAGATTCATTAGAAGAGCTGCTCAAGATTGCTGGTGAAAAGTTCGGAGGCTGCAAACctataaaagttattaatacAGAGAATGCAGAGATTGATGACATGAGTGTCATTCGAGATGGTGatcatctctttcttctttgcagtgataatgaaattttggGTTCATG 2294 0.4076 MSFSCNKSFFQRFCVDEFQMGSYAHSSFLSNDLLPSLGARINQGTRLRRHIISPFNPRYRAWELFLVVLVIYSAWICPFEFAFLPYKQDTLFIIDNIVNGFFAIDIILTFFVAYLDSHSYRLIDEPNKIAIRYISTWFIFDVCSTAPFQPISILFTNHSSELGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWIRCTKLIAVTLFAVHCAGCFYYLIADRYPDPEKTWIGAVYPNFKDASLWERYVTALYWSIVTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAASEFASRNQLPHRIQDQILSHLCLRFKTEGLKQQETLNGLPKAIRSSIAYHLFFPVVQKVYLFHGVSQDFLFPLVSEMEAEYFPPREDVILQNESPTDLYVVVSGAVDFIGNVDGQNQVIGKAGAGDTFGEIGVLYHRPQPFTVRTTELSQILRLNRTSLMNAIQASAEDAEIIMDNLFTRLKGKEGLDLEYPEQDPASPYGGTRESFSNACANNSQEGRCGNFRDSESRLFKVTSNDHFITKSEDGQRDLHATANRGNPEMVEILLERDANAKNPNTIGWTPKALVENQGNSTIPDPFMSCEKGKKPDEHRIEFTEPEILDHAINEPTRYRKQDGSRSINFPLENACTNYRSSTYNCSNDREAARCIKKRVTIHLPCEYRNTSERQHGKLIILPDSLEELLKIAGEKFGGCKPIKVINTENAEIDDMSVIRDGDHLFLLCSDNEILGS 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00176 764 ProSiteProfiles Ankyrin repeat profile. 561 593 IPR002110 GO:0005515
Bva14g00176 764 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva14g00176 764 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva14g00176 764 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva14g00176 764 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva14g00176 764 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva14g00176 764 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva14g00176 764 SUPERFAMILY Ankyrin repeat 559 610 IPR036770 -
Bva14g00176 764 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Bva14g00176 764 CDD CAP_ED 377 490 IPR000595 -
Bva14g00176 764 Pfam KHA, dimerisation domain of potassium ion channel 685 754 IPR021789 -
Bva14g00176 764 Gene3D Jelly Rolls 370 502 IPR014710 -
Bva14g00176 764 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Bva14g00176 764 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva14g00176 764 Gene3D Helix hairpin bin 301 367 - -
Bva14g00176 764 SMART cnmp_10 377 494 IPR000595 -
Bva14g00176 764 PANTHER POTASSIUM CHANNEL AKT1 1 763 IPR045319 GO:0005249|GO:0006813
Bva14g00176 764 SUPERFAMILY Voltage-gated potassium channels 54 300 - -
Bva14g00176 764 Gene3D - 546 617 IPR036770 -
Bva14g00176 764 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Bva14g00176 764 ProSiteProfiles KHA domain profile. 686 764 IPR021789 -
Bva14g00176 764 ProSiteProfiles Ankyrin repeat region circular profile. 561 587 - -
Bva14g00176 764 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 763 - -
Bva14g00176 764 Gene3D - 60 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00176 Bva-Chr14 894405 898268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00176 1 759 Ion Channels AT4G18290 61.257 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00176 K21867 - gmx:100811356 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00176 14 894405 898268 Bva14g00176 14 894405 898268 ECH