Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00163 ATGGCGAGGAAAGCTGAAACGTCTCTGAAGCCTCTCTCCTCCCCAAGAGCTTCTTCCGCCTCTGACAAAGCCTCCGCAAGAGATTCTAAGGACAAACTAGTATTGAAGGTAAAATCAAATGATGGAATGAAGAGATCTGTGAGGCAGACTAATTCAGCaaagaaaccaaaaccaaagctAAAGAAGAACCAGAAGAAGCTAGAATctaagaagccaaagaaaccTCCCACTGctttcttctacttcttAGAGGATTTTCGTAAACAATTTCAAGAGGAGAATCCAGATGTCAAATCAATGCGTGATATTGGCAAGGCATGCGGAGAGAAGTGGAAAACAATGACATATGAGGAGAAGGTTCAGTACTATGATATGGCAACAGAAAAACGAGCAGAATTTGATAGAGCAATGATAGAGTTTAACAAGAGAATGGAAAGTGGAGAGTACGAAGACGAGGAGGATTCAGAGTTTAGTGACTA 479 0.3716 MARKAETSLKPLSSPRASSASDKASARDSKDKLVLKVKSNDGMKRSVRQTNSAKKPKPKLKKNQKKLESKKPKKPPTAFFYFLEDFRKQFQEENPDVKSMRDIGKACGEKWKTMTYEEKVQYYDMATEKRAEFDRAMIEFNKRMESGEYEDEEDSEFSD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00163 159 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 1 157 - -
Bva14g00163 159 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 1 157 - -
Bva14g00163 159 Pfam HMG (high mobility group) box 72 140 IPR009071 -
Bva14g00163 159 CDD HMGB-UBF_HMG-box 77 137 - -
Bva14g00163 159 SUPERFAMILY HMG-box 57 143 IPR036910 -
Bva14g00163 159 Gene3D High mobility group box domain 65 156 IPR036910 -
Bva14g00163 159 MobiDBLite consensus disorder prediction 23 43 - -
Bva14g00163 159 MobiDBLite consensus disorder prediction 1 74 - -
Bva14g00163 159 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 72 141 IPR009071 -
Bva14g00163 159 SMART hmgende2 71 142 IPR009071 -
Bva14g00163 159 MobiDBLite consensus disorder prediction 50 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00163 Bva-Chr14 822915 825673 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bva14g00163 HMG_box 6.5e-19 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00163 - - gmx:100305607 182.57