Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00146 ATGGAAAAGGAGCCTCTGCTCCCATATTTTTgcccaacaaagaaaattttggcacCGACCAACCTGTTTACATTACCAGAGAACGATGAGTTGCATGTTCCTATGACCCCTTCAGAAGTCAAGGACCGGATTATTTTTGGCCCTTGTAGTTCCCCACAAGAGTCTACCCCCTTAATCGAGGCCTTAACACTCTCCCTGAATTCCCCAAGACCTTCTTCTTCCCAGGACCACGAAGCTCCACAAGCTGctcaatcccaatcccaacaACCTTGGCTCAATGATCCCAATTACCGATGGAACAAAACCAACCTCCACCGTTCCAAAACAGCGCCTGCCATGGCCGTGTTAAGCGATTTCAACCACCAATCTGCGGTTCCTAGACCCCAATCTAGTTCCCAATCAATTATTCGCCAAGCTGTTATTCTccttattgtttatttatcattGGGGGTTACTATATATTGGTTTAACAGGCATAATTTTATAGCAAGTGAGACTCATCCCGTCGTGGAtgcattatatttttgtatagtAACAATGTGTACCATAGGTTATGGTGATATAACTCCAAATAGTACAGCAACAAAGCTTTTCTCTATAATGTTTGTACTGGTCGGTTTTGGGTTTATTGACATATTGCTTAGTGGGATGGTGAGTTATGTTCTTGATTTGCAAGAGAATTACTTGCTTAGAACGGTGAAGAGTAAGGGGGAGAAGGATGCaacatcatatataattgatgTGAAGAAAGGGAGAATGAGAATTAGGATGAAGGTGGGCTTGGCATTGGGGGTTGTGATCCTTTGTACTACAGTCGGTGTTTTTGTTATGCATTATGTGGAGAGGCTTGGATGGGTggattctttttatctttcagTGATGTCAGTTACAACCGTTGGGTATGGTGATCAGACATTCAAGTCACTATCCGGTCGTATATTTGCTGCAATTTGGTTGCTTGTATCGACGCTTGCAGTGGCTCGGGCTTTCCTATATTTGGCCGAGGCAAGAGTGGATAAGCGGCATAGGAATATGGCAAAGTGGGTTCTTGGTCATGATATGACCGTTGCTGAGTTTCTTGCAGCAGACATAGACAATAATGGCTTTGTAAGCAAATCAGAATTTGTTATATACAAGCTTAAGGAGATGGGAAAGGTGTCAGAGAAAGACATTATGCAGATCAGCGAGAAGTTCGATAGGATAGACACTGGCAACTGTGGAAAAATAACACTTGCCGATCTCATGCAGGGTCATTATTG 1259 0.3979 MEKEPLLPYFCPTKKILAPTNLFTLPENDELHVPMTPSEVKDRIIFGPCSSPQESTPLIEALTLSLNSPRPSSSQDHEAPQAAQSQSQQPWLNDPNYRWNKTNLHRSKTAPAMAVLSDFNHQSAVPRPQSSSQSIIRQAVILLIVYLSLGVTIYWFNRHNFIASETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSIMFVLVGFGFIDILLSGMVSYVLDLQENYLLRTVKSKGEKDATSYIIDVKKGRMRIRMKVGLALGVVILCTTVGVFVMHYVERLGWVDSFYLSVMSVTTVGYGDQTFKSLSGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRNMAKWVLGHDMTVAEFLAADIDNNGFVSKSEFVIYKLKEMGKVSEKDIMQISEKFDRIDTGNCGKITLADLMQGHY 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00146 419 SUPERFAMILY Voltage-gated potassium channels 132 221 - -
Bva14g00146 419 PRINTS Two pore domain K+ channel signature 178 206 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva14g00146 419 PRINTS Two pore domain K+ channel signature 297 306 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva14g00146 419 MobiDBLite consensus disorder prediction 66 94 - -
Bva14g00146 419 ProSitePatterns EF-hand calcium-binding domain. 363 375 IPR018247 -
Bva14g00146 419 Gene3D - 341 418 - -
Bva14g00146 419 SUPERFAMILY Voltage-gated potassium channels 249 358 - -
Bva14g00146 419 PANTHER TWO-PORE POTASSIUM CHANNEL 3 84 414 - -
Bva14g00146 419 Gene3D - 243 340 - -
Bva14g00146 419 Pfam Ion channel 266 334 IPR013099 -
Bva14g00146 419 Pfam Ion channel 141 221 IPR013099 -
Bva14g00146 419 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 84 414 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva14g00146 419 SUPERFAMILY EF-hand 357 416 IPR011992 -
Bva14g00146 419 Gene3D - 133 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00146 Bva-Chr14 735665 737757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00146 4 417 Ion Channels AT4G18160 60.094 1.90e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00146 K05389 - gmx:100804249 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00146 14 735665 737757 Bva14g00146 14 735665 737757 ECH
Bva14g00146 14 735665 737757 Bva13g00090 13 413565 417709 ECH