Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00135 ATGATTGTTTCCCATATCAAATCTCTGTTCTACCTGAAGGGTATTCTCAGAACCTCACCAATTTCAAGCTCTTATGTTCTTCTGCAACAGAGTTCTTCAATTTTCACACACAAATACTGCACGGGGACTGTAAAGAAAGAGTCTTTTAGTGTGAAGTACCTCATAGAAAATTGTGGGTTTTCACCAGAAACAGCACTGTTGGTTTCTAAGCGTGTCTCCTTCGAATCCTCGGAAAAGCCTGACTCAGTTCTTGAGCTTTTTAGGAACTGTGGCTTTTCAGACTCTCAGTTGCGTGGTATCATTGGAAAGGTACCGTCCCTGCTTCGAAGCAACCCCATAAAAACAATTTGGCCAAAGCTAGAGTTTTTGCTGTCTAAAGGTGCTTCATGTTCTCAACTAGTTGAAATAGTTACCAGGAGTCCGAGATACTTGAAAAGAAGCTTAGCAGATCACATAATCCCTTGTTATGATTTTGTGAAAAGGTTCCTCCCTCATGACAAGAGGATCATTACAGCTATAAATCGGTGTAACGGCATCATTTGTGATTCCAATATGGTAAGTAATGTCAAACTCTTGCTTGACAACGGGGTACCAGAGTCTGGCATTGCTTCATTACTTCATACATGGCCTAGGTTACTCAACCTAACAAAAGATCAGTTTTCGGTGGCTGTTGAGGAAGTGAAGAAACTGGGACTTGATCCTTCAAAGTCAGCTTTCATTCCAGCATTATATGCCAAGAAGACCCTAAACAAAGGGGTGTGGGATAGGAAGGTTGATGTGTATAAGAAGTGGGGCTGGTCTGATGAAGCAATTGACAGGGCATTTTCACAGCATCCTTATTGTATGATGAAAGCTGAACATAAAATTGAGGCAGTGATGGGATTTTTTGTCAACCACTTGGGTTGGAACTCTGCAGTGATTGCTAAAAATCCagttattatttcatttagttTAGAGAAGAGAATCATTCCAAGGGCGTTTGTTTTGCAACATCTTCAATCAAGAGGTTTAATTAAGGACACTAAGGTTCTTAGAGCTTTTCATATTCCCGAAAAGACATTCTTAGAGAAATTTGTGAATTCTTTTAAGGATGATGCTCCTCAGTTGTTGAAATTgtatgaagagaaaatgaatcttTCAAGTTA 1145 0.3878 MIVSHIKSLFYLKGILRTSPISSSYVLLQQSSSIFTHKYCTGTVKKESFSVKYLIENCGFSPETALLVSKRVSFESSEKPDSVLELFRNCGFSDSQLRGIIGKVPSLLRSNPIKTIWPKLEFLLSKGASCSQLVEIVTRSPRYLKRSLADHIIPCYDFVKRFLPHDKRIITAINRCNGIICDSNMVSNVKLLLDNGVPESGIASLLHTWPRLLNLTKDQFSVAVEEVKKLGLDPSKSAFIPALYAKKTLNKGVWDRKVDVYKKWGWSDEAIDRAFSQHPYCMMKAEHKIEAVMGFFVNHLGWNSAVIAKNPVIISFSLEKRIIPRAFVLQHLQSRGLIKDTKVLRAFHIPEKTFLEKFVNSFKDDAPQLLKLYEEKMNLSS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00135 381 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 32 378 - -
Bva14g00135 381 SMART mt_12 203 233 IPR003690 GO:0003690|GO:0006355
Bva14g00135 381 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Bva14g00135 381 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Bva14g00135 381 SMART mt_12 167 198 IPR003690 GO:0003690|GO:0006355
Bva14g00135 381 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Bva14g00135 381 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Bva14g00135 381 Gene3D Transcription termination factor 3, mitochondrial 163 366 IPR038538 -
Bva14g00135 381 PANTHER CGI-12 PROTEIN-RELATED 32 378 IPR003690 GO:0003690|GO:0006355
Bva14g00135 381 Pfam mTERF 184 354 IPR003690 GO:0003690|GO:0006355
Bva14g00135 381 Pfam mTERF 84 290 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00135 Bva-Chr14 682034 683683 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva14g00135 mTERF 2.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00135 K15032 - twl:120002213 318.546