Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva14g00132 | ATGCACAAGTCACAACCCCTCTCCTGTGTCTCTCTCAATCATTTTCTGCTCCTTTTCACTCCTTGGGGCATATCATGGTCACGCTCTTGCTCTGTACCCTTCTCTCCTTCTCAGAAAGCATTCCCAGTGGGGTGGCGCAAAAAAGTAGCTGAAATAGTAGAAAAGACTGtgccttttctcttcttcactTCGCTAGTTTGCGATCGTTTTAGAGAGCTGATGGGTGATGCAATGAAGCAGTCTTTTGACAGTACATCTTCAGGTCCTACCGAGATTCCATCTGTAAATATATCTAAGGAAGTGGGACGTGTTTCATGGGAGATTTTATCTGGTTCAGATGCATACCATGCGTCATCTGATGCTACCCTGTTTTCGAGCTCATTACCTGTTTTGCCACATGAAAAGTTGAACTTGAATGACACTGAAAATGGTTTTCAAGCTGTTGATGACATCTCATCTGGCTTTCAAAAGATCCATCAAGATATTGAGGGCAATGATTCACTTGAAGGTCTTGATACCCATGCAATTGGACCCTCGCTTCCTGATGATGAGGAGGAGCTTTTAGCTGGCATAATGGATGATTTTGACCTAAGCGGCTTGCCTGGTTCCCTGGAGGACTTGGAAGAGTATGATCTTTTTGGTAGCGGTGGAGGTATGGAGCTGGAAACTGACCCACAGGAAAGTCTCAGTGTGGGTATGTCAAAATTAAGTTTCTCTGATGGTTCTATTGGCAATGGTGTGGCCCATTATTCTTTTCCTAATGGTGTGGGAACTGTTGCTGGAGAACATCCATATGGGGAACATCCTTCTCGAACATTATTTGTTCGAAATATTAACAGTAATGTGGAGGATTCTGATCTGAGAGCCCTTTTTGAGcaaTATGGTGATATTCGAACCCTCTATACGGCATGTAAACATCGTGGATTTGTAATGATTTCCTACTATGATATCCGTGCTGCTCGAACAGCTATGCGTGCATTACAAAACAAACCACTGCGACGCAGGAAACTTGACATTCATTTCTCAATACCAAAGGATAATCCATCAGACAAGGATATCAACCAAGGAACCTTGGTGGTGTTTAATTTGGATCCATCTGTTTCAAATGAAGACCTTCGTCAAATATTTATGGCTTATGGTGAGGTCAAAGAGaTAAGGGAAACACCGCACAAGAGGCATCATAAGTTTATCGAATATTATGACGTTAGAGCTGCAGAAGCAGCACTTAAGTCATTGAACAGGAGTGACATAGCTGGTAAACGCATAAAGCTAGAACCAAGTCGCCCTGGTGGAGCTCGTCGAAATTTAATGCTGCAAATAAACCAAGAGCTTGAGCCAGATGAATCTCGAAGTTTCCGGCTGCAAGTGGGTTCACCACTTACAAACTCCCCACCAGGTAACTGGCTGCATGTCAACAGTCCTGTTGAACATAATCTAATGCAAACTATGAGTAAATCCCCTGGATCTAGAATCATGAGCCCTACAACAGGAAACCATTCACCTGGGTTAGCTTCAATTTTGCAACCTCAGGTATCAAATACTATCAAGGGTGCAACCATTGGCAAGGACTTAGGAAAGAGTATTTATGGAGAGCACTTATATGCTACAAACAGTTCATCACATGGGGCTGCATTTCAGTCACATTCATTGCCGGAGCCAGATTTCACCCAATATCAGGGTGCATTACCCTCTTTTGGTCCATCGACTTCCAATGGATCCTCTATGGAGACCTTGTCTGGCCCACAATTTCTATGGGGAAGTTCAAGCCTATACTCAGAGCACACCAAAGCTTCAGCTTGGGCAAGGCCATCTGTTGGGCATCCATTTACATCAAATGGCAAGACCCATGCCTTCCCATATGCAGAGTCACCAGATGCCTCTTTCATGAATCGTGTTGCTTTTGGAGGCATGAGTTTAGGACACAATGGGATAAATATGTTAGAAAATGGCTCTTCAAACGTCAGAATGAGATCTTCTCCAAGGGTTAGCCCAGTCTTTTTGGGCAATGGTCCTTACCCAGGACTGCCACATACAACATTTGAGGGTTTGACTGACCGTGGGAGGATCAGACGGACAGAGAACAATGGGAGCCAAGTTGACAGCAAGAAACAATTTCAGCTTGACTTGGATAAGATTATAAGTGGTGAAGATAAAAGGACTACTTTAATGATAAAGAACATCCCAAATAAATACACTTCAAAAATGTTACTAGCTGCCATTGATGAATATCACAGGGGTACCTATGATTTTCTCTACCTGCCAATTGATTTTAAGAATAAATGCAACGTGGGCTATGCATTTATCAACATGCTCTCACCATCACTCATTATTCCATTCTATGAGTCATTTAATGGGAAGAAGTGGGAGAAGTTTAATAGTGAGAAAGTTGCTTCGTTGGCATATGCCCGAATTCAAGGAAAGACTGCCCTTGTTAGCCACTTCCAAAATTCGAGTTTGATGAATGAAGATAAGCGCTGCCGCCCTATTCTTTTCCACTCAGAGGGTTCTGAAGGTGGTGATCAGATCATACAAGAGCATCTTGCCTCCAACAATTTGAATCTTCATATCCTTAGGCCAAGTGAGTCACATTCAAGTGATTTTCCGGGAAGCCCTCCGAAGGATGGCCCTCCTGAGAACTTGGAGATAAGTTA | 2651 | 0.4281 | MHKSQPLSCVSLNHFLLLFTPWGISWSRSCSVPFSPSQKAFPVGWRKKVAEIVEKTVPFLFFTSLVCDRFRELMGDAMKQSFDSTSSGPTEIPSVNISKEVGRVSWEILSGSDAYHASSDATLFSSSLPVLPHEKLNLNDTENGFQAVDDISSGFQKIHQDIEGNDSLEGLDTHAIGPSLPDDEEELLAGIMDDFDLSGLPGSLEDLEEYDLFGSGGGMELETDPQESLSVGMSKLSFSDGSIGNGVAHYSFPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSDLRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFMAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQINQELEPDESRSFRLQVGSPLTNSPPGNWLHVNSPVEHNLMQTMSKSPGSRIMSPTTGNHSPGLASILQPQVSNTIKGATIGKDLGKSIYGEHLYATNSSSHGAAFQSHSLPEPDFTQYQGALPSFGPSTSNGSSMETLSGPQFLWGSSSLYSEHTKASAWARPSVGHPFTSNGKTHAFPYAESPDASFMNRVAFGGMSLGHNGINMLENGSSNVRMRSSPRVSPVFLGNGPYPGLPHTTFEGLTDRGRIRRTENNGSQVDSKKQFQLDLDKIISGEDKRTTLMIKNIPNKYTSKMLLAAIDEYHRGTYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYESFNGKKWEKFNSEKVASLAYARIQGKTALVSHFQNSSLMNEDKRCRPILFHSEGSEGGDQIIQEHLASNNLNLHILRPSESHSSDFPGSPPKDGPPENLEIS | 883 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva14g00132 | 883 | CDD | RRM1_MEI2_like | 270 | 346 | IPR034453 | - | |
Bva14g00132 | 883 | SUPERFAMILY | RNA-binding domain, RBD | 268 | 431 | IPR035979 | GO:0003676 | |
Bva14g00132 | 883 | CDD | RRM3_MEI2_like | 722 | 807 | IPR034454 | - | |
Bva14g00132 | 883 | SUPERFAMILY | RNA-binding domain, RBD | 721 | 805 | IPR035979 | GO:0003676 | |
Bva14g00132 | 883 | SMART | rrm1_1 | 272 | 340 | IPR000504 | GO:0003723 | |
Bva14g00132 | 883 | SMART | rrm1_1 | 721 | 797 | IPR000504 | GO:0003723 | |
Bva14g00132 | 883 | SMART | rrm1_1 | 357 | 425 | IPR000504 | GO:0003723 | |
Bva14g00132 | 883 | Pfam | RNA recognition motif 2 | 719 | 815 | IPR007201 | - | |
Bva14g00132 | 883 | Gene3D | - | 260 | 355 | IPR012677 | - | |
Bva14g00132 | 883 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 273 | 337 | IPR000504 | GO:0003723 | |
Bva14g00132 | 883 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 358 | 423 | IPR000504 | GO:0003723 | |
Bva14g00132 | 883 | PANTHER | PROTEIN MEI2-LIKE 2 | 621 | 877 | - | - | |
Bva14g00132 | 883 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 356 | 429 | IPR000504 | GO:0003723 | |
Bva14g00132 | 883 | CDD | RRM2_MEI2_like | 355 | 425 | - | - | |
Bva14g00132 | 883 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 271 | 344 | IPR000504 | GO:0003723 | |
Bva14g00132 | 883 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 79 | 622 | - | - | |
Bva14g00132 | 883 | MobiDBLite | consensus disorder prediction | 561 | 577 | - | - | |
Bva14g00132 | 883 | Gene3D | - | 356 | 453 | IPR012677 | - | |
Bva14g00132 | 883 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 621 | 877 | - | - | |
Bva14g00132 | 883 | MobiDBLite | consensus disorder prediction | 542 | 577 | - | - | |
Bva14g00132 | 883 | MobiDBLite | consensus disorder prediction | 860 | 883 | - | - | |
Bva14g00132 | 883 | PANTHER | PROTEIN MEI2-LIKE 2 | 79 | 622 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva14g00132 | Bva-Chr14 | 667772 | 673484 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva14g00132 | 266 | 464 | Eukaryotic Initiation Factors Gene Family | AT1G71770 | 25.333 | 1.47e-06 | 50.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva14g00132 | - | - | gmx:100800877 | 1321.22 |