Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00131 ATGAGCTGCGGAAGCAGGGAGAAAGATACAACCATGTCGACATCATCTGCAAGCAACACGAAGACCAGTACCTTGTTCTTAAACAAGGACAAGACACTTGCTCAGTACAGTGCCGATGCTGGAATTTTGGCCGAGTTTGAGCAATCTGCGGTGTCTGGAAAATCATTCGACTATTCAAAGTCGGTTCTTTATCCTCCTAAATTGGTGTCGGGAGAGAAAATGGCTGATTATTTGTCGAAAATCCAAAGAGGGGGTCTTATTCAGCCCTTTGGGTGTATGATTGCAATTGAAGAACCGACTTTCAGAATCATCGGCTACAGTGAGAATTGCTTTGAATTGTTGAGTTTAAGCAGACAATTTGATTCCAATCAATTTAAGGGTCTAATTGGAGTTGATGCCACAACACTCTTCACGCCTTCTTCTGGGGCTTCCCTTGCAAAAGCTGCGGCTTCTAGGGAAATTTCACTTTTGAACCCAATTTGGGTCTATTCAAGGGCAACCCTGAAGCCATTCTATGCTATAATGCATAGAATTGATGTGgggattgtaattgatttgGAGCCTGCAAAGTCTAGTGATCGTGCATTGTCACTTGCTGGTGCTGTGCAGTCTCAGAAGCTAGCTGTTAGGGCAATCTCAAGGCTACAATCTCTTCCCGGGGGAGACATTGGTGTTTTATGTGACACTGTTGTTGAGGAAGTGCAGAAGCTCACTGGTTATGACAGGGTTATGGTTTATAAGTTCCATGATGATGATCATGGTGAAGTTGTATCTGAGATTAGAAGGTCAGATTTAGAGCCCTATTTGGGTTTGCATTATCCAGCCACGGATATCCCTCAAGCTGCTCGCTTTTTGTTCAAGCAGAATCGGGTAAGGATGATCTGTGATTGCAATGCAAATCCGGTTAAGGTTATTCAGAGTGAAGAGTTAAGGCAGCCTCTTATCTTGGTCAATTCAACCCTTCGGTCACCACATGGATGTCACACTCAATACATGGCTAACATGGGTTCCATTGCTTCTCTGGTAATGGCAATTATAGTCAATGGAAATGATACAACAAGGCTTTGGGGTTTGCTAGTCTGTCATCACACATCACCGCGCTATGTGCCTTTTCCACTTCGCTATGCTTGTGAGTTCCTAATGCAGGCTTTTGGACTGCAGCTTTACATGGAGATTCAATTGGCATCACAACTGGCAGAGAAGAAAAGTCTCAGAACTCAGACCTTACTGTGTGACATGCTCCTCCGTGATGCCCCATCCGGTATTGTGACTCAATCTCCCAGTATCATGGACCTTGTTAAGTGTGATGGGGCTGCAATGTATTATGATGGAAAGTGTTGGCTGTTAGGCATAACCCCAACTGAATCACAGGTGAAAAACATTGCTGAATGGCTACTTAGTTGTCATGGGGATTCAACAGGTTTGAGCACAGATAGCTTGGCAGATGCTGGTTATCCAGGTGCTGCTTCACTGGGGGAAGCAGTTTGTGGCATGGCCACAGCAAGAATCAATTCAAGAGATTTCTTGTTCTGGTTCAGGTCTCACACTGCCAAGGAAGTTAAATGGGGAGGAGCCAAGCATCACCCGGAGGACAAGGATGATGGCGGAAAAATGAACCCAAGATCATCTTTTAACGTTTTTCTTGAAGtagtcaaaaacaaaagtttgcCTTGGGAAGTGTCAGAAATCAATGCTATTCACTCATTACAGCTTATAATTAGAGACTCATTCCAAGACGCAGAGAACTCAGGTCCCAAGGCTCTAAATTATGTACAGCAGCAGAGTGATACTGCAATGGGTGAGGTGGATGAACTCAGCTCGGTGGCATTTGAAATGGTCAGATTAATTGAAACAGCAACAGTTCCAATTTTTGGTGTTGACTCAGCTGGTCTAATCAATGGATGGAATGCAAAAATTGCTGAATTGGTGGGGCTTCCGGCTACTGAAGCTATGGGAAAATCCCTATTAAGTGAAGTAATACATGAGGACACACGAGAAAAAGTCGAAAATATTTTAAGCAGAGCCTTGCAAGGTCAGGAGGACAAAAATATTGAGTTGAAATTAAAGCACTTTGGGCTTCATCAAGAAAAGTCAGCTGTGTACATTATAGCCAACGCCTGCACAAGTAGGGATTACACAAACGCTGTTGTTGGAGTGTGCTTTGTGGGTCAAGATGTCACTACCGAGAAAGTTGTTCTTGATAAATTCGTCAGGTTGGAAGGTGATTACAAAGCTATCATACAGAGTCTCAGTCCACTGATTCCGCCCATTTTTGCTTCTGATGAGAATGCTTGCTGCTCTGAGTGGAATGCAGCCATGGAAAGATTAACTGGTTGGAAGAGAGATGAAGTTATCGGAAAAATGCTTCCTGGGGAAATCTTTGGGAATTTATGTCAGTTGAAAGGTCAAGATACACTgactaattttatgattttattgtatCGAGGAATCGGTGGTCAAGATTCCGAGAAGTTtccttttggattttttaatagaaaggGAGAGTTCATAGGTGTTTCCTTAACAGCTAGCAAGAGGATTGATGCTGTCGGAAACATAGTTGGTTGTTTCTGCTTCCTGCAGATTGTACCATCAGACCAGTATCAGCTCTCAGAAGGACACGAGTCAAAAAGCAGGAATCGCTCTTCCGAATTTAAGCAGTTGGCTTATATATTACAAGAAATGAAGAATCCCTTAAATGGCATACGCTTCACACACAAACTTCTGGAAAACACCGCTGTCTCAGAAAGCCAGAAACAATTCCTTGAAACTAGCAATGCATGCGAAAGACAGATTATGGCAATCATTGAGGATACAGATTTCCTAAGTCTTGAAGAAGGCACTGTGCAGCTAAACATGGAAGAGTTCGTTCTCGGAAACATTTTAGATGCCATTGTCAGTCAAGTCATGATCTTGATAAGAGGAAAAAACCTGCAGCTGTTTCACGAAATTCCAGATGAGATCAAAACACTTGAACTATACGGTGATCAAATTAGGCTTCAGGTTGTCTTATCTGACTTTTTGCTTAATGTGGTCAGCCATACGCCATCTCCTAACGGCTGGgtagaaatcaaaatttcaccTGGTATCAAGATTATACAGGATGGCAATGAGCTTATACATCTGCAGTTCAGAATGACTCATGCTGGTCAAGGTTTGCCTTCTACTGTTCTTGAGGATATGTTTGAAGGAGGAAACCAATGGAAAACACAGGAAGGTCTAGGGCTAAACATGTCCAGGAAAATTCTCAGTAAGATGAACGGTCATGTCCACTATGTAAGAGAACATAACAAGTGCTACTTCCTCATTGATCTTGAACttagaacaagaaaagaaaggccGTGGATTTTGCAAGAAGATACAAGCATGATGATTTA 3377 0.4143 MSTSSASNTKTSTLFLNKDKTLAQYSADAGILAEFEQSAVSGKSFDYSKSVLYPPKLVSGEKMADYLSKIQRGGLIQPFGCMIAIEEPTFRIIGYSENCFELLSLSRQFDSNQFKGLIGVDATTLFTPSSGASLAKAAASREISLLNPIWVYSRATLKPFYAIMHRIDVGIVIDLEPAKSSDRALSLAGAVQSQKLAVRAISRLQSLPGGDIGVLCDTVVEEVQKLTGYDRVMVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNANPVKVIQSEELRQPLILVNSTLRSPHGCHTQYMANMGSIASLVMAIIVNGNDTTRLWGLLVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMEIQLASQLAEKKSLRTQTLLCDMLLRDAPSGIVTQSPSIMDLVKCDGAAMYYDGKCWLLGITPTESQVKNIAEWLLSCHGDSTGLSTDSLADAGYPGAASLGEAVCGMATARINSRDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGKMNPRSSFNVFLEVVKNKSLPWEVSEINAIHSLQLIIRDSFQDAENSGPKALNYVQQQSDTAMGEVDELSSVAFEMVRLIETATVPIFGVDSAGLINGWNAKIAELVGLPATEAMGKSLLSEVIHEDTREKVENILSRALQGQEDKNIELKLKHFGLHQEKSAVYIIANACTSRDYTNAVVGVCFVGQDVTTEKVVLDKFVRLEGDYKAIIQSLSPLIPPIFASDENACCSEWNAAMERLTGWKRDEVIGKMLPGEIFGNLCQLKGQDTLTNFMILLYRGIGGQDSEKFPFGFFNRKGEFIGVSLTASKRIDAVGNIVGCFCFLQIVPSDQYQLSEGHESKSRNRSSEFKQLAYILQEMKNPLNGIRFTHKLLENTAVSESQKQFLETSNACERQIMAIIEDTDFLSLEEGTVQLNMEEFVLGNILDAIVSQVMILIRGKNLQLFHEIPDEIKTLELYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGIKIIQDGNELIHLQFRMTHAGQGLPSTVLEDMFEGGNQWKTQEGLGLNMSRKILSKMNGHVHYMLLYVQGIRRVISREVSCITLRPDRNMVNADSVYDV 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00131 1117 Pfam His Kinase A (phospho-acceptor) domain 876 935 IPR003661 GO:0000155|GO:0007165
Bva14g00131 1117 SUPERFAMILY GAF domain-like 389 567 - -
Bva14g00131 1117 ProSiteProfiles PAS repeat profile. 597 668 IPR000014 -
Bva14g00131 1117 SMART HKATPase_4 984 1108 IPR003594 -
Bva14g00131 1117 SUPERFAMILY PYP-like sensor domain (PAS domain) 745 847 IPR035965 -
Bva14g00131 1117 PANTHER TWO-COMPONENT HISTIDINE KINASE 13 1083 - -
Bva14g00131 1117 CDD PAS 742 850 IPR000014 -
Bva14g00131 1117 ProSitePatterns Phytochrome chromophore attachment site signature. 311 320 IPR013516 -
Bva14g00131 1117 Pfam PAS fold 600 715 IPR013767 GO:0006355
Bva14g00131 1117 Pfam PAS fold 731 850 IPR013767 GO:0006355
Bva14g00131 1117 CDD HATPase_Phy-like 983 1082 IPR044767 -
Bva14g00131 1117 Gene3D - 192 542 IPR029016 -
Bva14g00131 1117 ProSiteProfiles Phytochrome chromophore attachment site domain profile. 211 371 IPR016132 -
Bva14g00131 1117 SMART gaf_1 211 391 IPR003018 GO:0005515
Bva14g00131 1117 SUPERFAMILY PYP-like sensor domain (PAS domain) 603 711 IPR035965 -
Bva14g00131 1117 CDD HisKA 877 932 IPR003661 GO:0000155|GO:0007165
Bva14g00131 1117 Gene3D PAS domain 599 719 - -
Bva14g00131 1117 CDD PAS 608 679 IPR000014 -
Bva14g00131 1117 ProSiteProfiles Histidine kinase domain profile. 879 1081 IPR005467 -
Bva14g00131 1117 PRINTS Phytochrome signature 529 547 IPR001294 GO:0006355|GO:0009584
Bva14g00131 1117 PRINTS Phytochrome signature 713 733 IPR001294 GO:0006355|GO:0009584
Bva14g00131 1117 PRINTS Phytochrome signature 600 616 IPR001294 GO:0006355|GO:0009584
Bva14g00131 1117 PRINTS Phytochrome signature 311 332 IPR001294 GO:0006355|GO:0009584
Bva14g00131 1117 PRINTS Phytochrome signature 496 515 IPR001294 GO:0006355|GO:0009584
Bva14g00131 1117 PRINTS Phytochrome signature 411 431 IPR001294 GO:0006355|GO:0009584
Bva14g00131 1117 PRINTS Phytochrome signature 619 634 IPR001294 GO:0006355|GO:0009584
Bva14g00131 1117 PRINTS Phytochrome signature 693 710 IPR001294 GO:0006355|GO:0009584
Bva14g00131 1117 PRINTS Phytochrome signature 126 148 IPR001294 GO:0006355|GO:0009584
Bva14g00131 1117 PRINTS Phytochrome signature 226 245 IPR001294 GO:0006355|GO:0009584
Bva14g00131 1117 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 929 1082 IPR036890 -
Bva14g00131 1117 Pfam Phytochrome region 394 569 IPR013515 GO:0006355|GO:0009584
Bva14g00131 1117 SMART HisKA_10 872 937 IPR003661 GO:0000155|GO:0007165
Bva14g00131 1117 PANTHER PHYTOCHROME E 13 1083 - -
Bva14g00131 1117 SUPERFAMILY PYP-like sensor domain (PAS domain) 70 180 IPR035965 -
Bva14g00131 1117 Gene3D PAS domain 744 856 - -
Bva14g00131 1117 SUPERFAMILY GAF domain-like 191 377 - -
Bva14g00131 1117 PIRSF Phytochrome_conventional 1 1091 IPR012129 GO:0006355|GO:0009585|GO:0009881|GO:0017006|GO:0042803
Bva14g00131 1117 Pfam GAF domain 211 381 IPR003018 GO:0005515
Bva14g00131 1117 Gene3D PAS domain 69 314 - -
Bva14g00131 1117 ProSiteProfiles PAS repeat profile. 731 783 IPR000014 -
Bva14g00131 1117 SMART pas_2 599 666 IPR000014 -
Bva14g00131 1117 SMART pas_2 730 799 IPR000014 -
Bva14g00131 1117 TIGRFAM sensory_box: PAS domain S-box protein 604 719 IPR000014 -
Bva14g00131 1117 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 984 1105 IPR003594 -
Bva14g00131 1117 Pfam PAS fold 66 178 IPR013654 GO:0006355
Bva14g00131 1117 Gene3D - 386 559 IPR043150 -
Bva14g00131 1117 Gene3D - 914 1083 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00131 Bva-Chr14 661556 667123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00131 2 1082 Histidine Kinase Gene Family AT4G18130 64.593 0.0 1471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00131 K12123 - gmx:100808192 1777.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00131 14 661556 667123 Bva14g00131 14 661556 667123 ECH