Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00128 AtggcaagaaagaaaatagagatcAAGAAGATTGAGAACATAACAGCGAGGCAGGTGACTTTCTCTAAGAGGAGGAAAGGTATTTTCAAGAAGGCTCAGGAGCTGTCAACTCTTTGTGATGCTGAGATAGCTCTTATAGTTTTCTCTGCCACTGGCAGATTGTTCCAGTTTGCTAGTTCAAGTATGGAGAGCGTAATTGAAAGGCATATTCTGCGCTCAGAGGTCCATGACAAATTAGATGAGCCATCTACTGAACTGCAGCTTATGTCAAGGGACTACAGTACTCTGAACAAGTTGTTGGAGGAGAAAACTCAGGAACTGAGGCGGTTGAACGGAGAAGAACTGCAAGAActgaatttaaaagaattagagAAACTAGAAGATCTACTCAAGACATGCTTGAGCCGAGTTACTAAAGCCAAGAACGAAAGCCTTCTAACAGAGATCAGCACCCTTAGGAAGAAGGGAGGCCAGCTAAGGGAAGAAAATCGCCGATTAAAGCAGgttcaGATTCTCCAACCCGAACAAGGCCAATTGTATGATGCATCTCTTTG 554 0.4043 MARKKIEIKKIENITARQVTFSKRRKGIFKKAQELSTLCDAEIALIVFSATGRLFQFASSSMESVIERHILRSEVHDKLDEPSTELQLMSRDYSTLNKLLEEKTQELRRLNGEELQELNLKELEKLEDLLKTCLSRVTKAKNESLLTEISTLRKKGGQLREENRRLKQVQILQPEQGQLYDASL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00128 184 CDD MADS_MEF2_like 2 69 IPR033896 GO:0000977|GO:0045944
Bva14g00128 184 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bva14g00128 184 Gene3D - 13 84 IPR036879 GO:0003677|GO:0046983
Bva14g00128 184 ProSiteProfiles K-box domain profile. 86 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva14g00128 184 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bva14g00128 184 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bva14g00128 184 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bva14g00128 184 Coils Coil 123 143 - -
Bva14g00128 184 Pfam K-box region 83 168 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva14g00128 184 SUPERFAMILY SRF-like 3 84 IPR036879 GO:0003677|GO:0046983
Bva14g00128 184 PANTHER MADS-BOX PROTEIN AGL24-LIKE ISOFORM X1 1 172 - -
Bva14g00128 184 Coils Coil 86 116 - -
Bva14g00128 184 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bva14g00128 184 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bva14g00128 184 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 172 - -
Bva14g00128 184 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00128 Bva-Chr14 643142 648005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00128 1 168 MADS-box Gene Family AT2G22540 56.805 2.56e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bva14g00128 K-box 1.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00128 - - nnu:104611910 174.481