Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00106 atgaaaatgaatgttGTGCTTCTTCTTGGACTTGTCATCACAAGTCTTGCTTCAACTGCATCTGCCATTGCTGGCACTGCAACTTATTACACCGTATACGTTCCGTCTGCATGCTATGGATACGAAGATCAAGGAACGTTGATTGCAGCAGCAAACCCATCACTTTATAACAATGGTGCTGCATGTGGCAGAATGTACAGGGTGACTTGCACTGGTGGAACCAACAACGTACCAAATCCATGCAGGAGTGGCAGTGTCACCGTCAAGATTGTCGATCTTTGCCCTGGCTGCGGAGAAAATCAACTGGATCTCTCTCAGGAAGCTTTCTCCCAAATCGCTAACCCTGATGCTGGAAGAATTACAATTGACTACACACAGGTTTG 383 0.4517 MKMNVVLLLGLVITSLASTASAIAGTATYYTVYVPSACYGYEDQGTLIAAANPSLYNNGAACGRMYRVTCTGGTNNVPNPCRSGSVTVKIVDLCPGCGENQLDLSQEAFSQIANPDAGRITIDYTQV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00106 127 Pfam Lytic transglycolase 49 124 IPR009009 -
Bva14g00106 127 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 24 127 IPR007112 -
Bva14g00106 127 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 126 IPR044206 GO:0009627|GO:0048046
Bva14g00106 127 SMART dpbb_1 48 124 IPR007112 -
Bva14g00106 127 Gene3D - 18 127 IPR036908 -
Bva14g00106 127 SUPERFAMILY Barwin-like endoglucanases 12 127 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00106 Bva-Chr14 543173 544313 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00106 47 126 Expansin Gene Family AT2G45110 38.043 9.49e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00106 - - egt:105952282 196.823