LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva14g00087	ATGGTGAAACACAACAATGTTATCCCTAATTCACACTTCCGAAAACACTGGCAGAACTACGTCAAAACATGGTTTAATCAGCCTGCTAGGAAAACCCGGAGACGACTCGCAAGACAGAAGAAAGCCGTGAAGATTTTCCCTCGTCCCACTGCTGGATCGCTCCGCCCTATTGTCCATGGGCAGACTctgaaatataatatgaaagtGAGGGCTGGCAGGGGCTTCTCTCTTGAAGAACTCAAGTCAGCTGGCATTTCAAGGAAAATTGCGAGAACCATAGGGATAACTGTTGATCATCGCAGGAAGAACCGTTCGCTGGAGAGTCTTCAGGCCAATGCGCAGAGGTTGAAGACATACAAGGCTAAGTTAGTTGTCTTCCCCAGACGTGCTCGCAAATCAAAGGTGAGAATAATTGGCTGGGATTCTGCTCCAGAAGAGCTGGCTACGGCAACTCAGGTCCAGGGTCCGTACTTGCCTATTGTACGTGAGAAGCCAACTGTGGAGCTTGTGAAAGTTACTGAAGATATGAAGTCGTTTAAGGCCTACAACAAACTACGGCTGGAGCGGACCAACAAGCGACATCTCGGTGCAAGGTTGAAGAAAGCAGCAGAGGCCGAGAAGGAAGACAAGAAGTA	635	0.4772	MVKHNNVIPNSHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGSLRPIVHGQTLKYNMKVRAGRGFSLEELKSAGISRKIARTIGITVDHRRKNRSLESLQANAQRLKTYKAKLVVFPRRARKSKVRIIGWDSAPEELATATQVQGPYLPIVREKPTVELVKVTEDMKSFKAYNKLRLERTNKRHLGARLKKAAEAEKEDKK	211

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva14g00087	211	PANTHER	60S RIBOSOMAL PROTEIN L13	1	211	IPR001380	GO:0003735\|GO:0005840\|GO:0006412
	Bva14g00087	211	PANTHER	60S RIBOSOMAL PROTEIN L13	1	211	-	-
	Bva14g00087	211	Hamap	50S ribosomal protein L13e [rpl13e].	45	128	IPR001380	GO:0003735\|GO:0005840\|GO:0006412
	Bva14g00087	211	Pfam	Ribosomal protein L13e	7	189	IPR001380	GO:0003735\|GO:0005840\|GO:0006412
	Bva14g00087	211	ProSitePatterns	Ribosomal protein L13e signature.	70	84	IPR018256	GO:0003735\|GO:0005840\|GO:0006412
	Bva14g00087	211	Gene3D	-	171	211	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva14g00087	Bva-Chr14	453786	455098	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva14g00087	2	196	Cytoplasmic Ribosomal Protein Gene Family	AT3G49010	80.000	1.15e-115	326

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva14g00087	K02873		-	twl:120016078	349.362