Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00082 atgattaacCAGAATGGAGGTAATTCTCAAGCTGGCGATGGTGCTTGTGCCTTGTGTAGGCATCAGAGGAGAACGTGTAGTGCAAATTGCGGGTTTAGAGAATTCTTTCCGGCAGAAAGATttgaagaatttcaaaatGCTTACAAACTATTTGGAGTAagcaatataataaaaatgatggaGTCCGTGGAACCGGAACAACGCCGAGACTGTGCCGACTCCATACTTACAGAGGCTAATATCTGGAATAATAGCCCTGCTGGTCATGGTTGTCTTGCTTACGTCCAAAATCTCGTGTCCCAAGTACGTTCTATAGAGTTGGAAAGGGACAATGTGAACAGACTACTTGCATTCTTCAGGGCCACCCGTGCACATAGACATAGTGTCTCAGATTCTCAAAGGCCCTCAGGCTCAGAGTCTCAGCCTAGTGAAGTAGTACGCATGAATGAAGAACATTACAGGAGTGAGAGTGTTCATAGGTTTAGACAAGAAGGAGAATCgagTGGTGTTTCCAAGGCGGATGACAAGGGGAAAAAGATTGCTGAAGAAGACGAGACGAAGAAACCACCCACCGACCCTTTCTCTAGTGTGAAAGAACCGAAGAAATCAAATCACATGGAAAAGCAAAGGAATTCAAATTTCTCTCGATCATATGGATTTTGTCATTTACTTTTTGTAATCCTCTCTCTTCTGCATGAAGCGTTTATAGTCTCACTTGTTTGTACTCTTCTTCGCACTAAAACAGTCGGTTACATTGCTTATCACCCAAACCCCAAATCGAGGTCAACAAATAGGGTTTGTTTGTTACTTGACTCTGGTGTTGAATTGAGCCGTGGAggctatatatacatacatggttCAGCTTTTGCAGGTGCAGTTAGTTCCTCGGGGATGTCGAACATGGATATAGGAATGGGAGGTACAGGTAATAGTCGTCAACCTGGTGAATCAGGAGATATACAAGAGGCTTCCAGCTCTCACAAGAGGAAAAAGTCCAGTAAGCGTCACTCTGAACAACAGATACAAGTTCTGGAAAGCTTTTTCAAGGAATGCCCGCATCCAGATAAAGATCAACAGCGCCAATTATCCAGGATGGTGGGTCTAGAACAGCAAcagataaaattttggtttcagAATAAAAGAACTCATACGAAGGCTCTATTTGAGAGATCAAGCAATGATGCTCTTCGGGCTGAGAATGAAAATATCAACGATGAAAACCTTGGGATTAAAGAGGTACTCAAGACTCTAAAATGTAAATCATGTGCCGGTTCGGTCTTTCCAGAAAATAGAGTGGACCAACATATTCTACAAAGTCTGCAGCAGGAAAATGCCCTACTAAAACAAGAGCATGAGAAAGTATGTAGCCTTCTTTCAGCGTACACCGGGAAACCCATAACAGAACTTGTGGCGCTGGCTTCTGCCCTAGGATCTACGTTGGATCTGCTGTCAGGAATTTCCTCAAATGATCATGGGAATGGGAATGGGAGTAGTTCTGGGCTTGAGCTCAATTTTGGTTCATCGTCAGGTGCTGCAATTTCTGGCAATAATATTGTGTTGGATTACTGTCTGAGAGGGATTACAAGTAAGGAAAGGGCAGTAATGTTAGAGACTGCTACTAGTGCTACCAAAGAATTAGTTAGGCTCTTGGATGATGATATCTTATGGGTCAAGTCTCAAGTCGATGGGAGATTAGTTCTTCGTTGCGATGTCTATGAAGAAATATTTCCTAATACTAATTATCACCTCAAAAGTTCCAGTGCACATTTAGAATCTTCGAAAGACTCAAGAATAGTGAGCATGAGTGCAATGCAGTTGGTTGACATGTTTTTAGATTCGGATAAATGGGTTGATCTTTTCCCAACCATTGttacaaaagcaaaaacaatcgAGGTTCTTCAAATTGGTTTGCCAGAAAACCGAGATGGGGCCTTGCAGCTGATGTATGAACAAATTCACGTTCTTTCTCCGTTGGTGCCACCTCGGgagtttttcttccttcgCCATTGCCAGCAAATTAAGTCTGGCATATGGGTGATCATGGATGTATCAATCGATGATTTGAGAGAGAATGCCTCCCGTCCTCGCCTCTGGAAACTTCCTTCTGGCTGCATGATTCAAGAAACGCCCAATGGGACCTCCATGgttacGTGGGTGGAACATGTAGAAGTGGATGAGAAAACCCAAAGTCACTCTCTTTACAGGGAGCTTCTTGGTAGTGGTATTGCTTTTGGAGCCGAAAGATGGGTTGTAACACTTGAAAGAATGTGTGAGAGATTTGAATATTCCTTTCGCGAAAGTATAATAGCCAGTCAAGAAGCTTTGGGAGtgaTCAGTTTACCTGAAGGCAGGAGGAGCATTGCGAAGCTCGCTAATCGGATGGTTAAGAATTTCAGTGAAATGCTGAACATGTCAGGTAAGCAGGATTGCCCCGAGGCGAAGAGCAGTCACGGAGTTCAAGTCTCAGTTTGCAGAAACACGGAAGCAGGCAAACCAGGTGGCGTGATTGTCAGCATGGCTACCTCCCTTTGGCTTCCTCTCCCTTATCAGGCTGTTTTTGACTTTCTCAAAGATGAAACCAAACGAGCTCAGTGGGACGTGCTTTGCGATGGAAAACGGCCGCATGAGATTGCACGCATATCAAATGGAGTTGATCCAAGGAACTGTACATCAATTATTCAGCCTTTCAATCTTTCGGAGATGAATCTATTGATTCTTCAAGAGACTTGCATAGACCCTTTGGGATGTGTGCTCGTGTATGCTCCCATTGATATGACAGCAATAAATGTGGCCATGTGCGGAAGAGACTCTTCAAAACTTCCAATTCTTGCATCTGGCTTTCTTATCGGCCCAACCAGCCCAAATGCCTCGCCCTCGCTCCTCACGGTAGCTTTCCAAATACTCATTTCAACTTCATTGTCTACAAAGGAATTGAACATGGAGTTGGTCGCAGCTGTCAATGCACTTCTATGCTCCACAGTCCACAAAATAAAGCTTGCTTTGAATTATTCTGGACTGGATTA 3023 0.4211 MINQNGGNSQAGDGACALCRHQRRTCSANCGFREFFPAERFEEFQNAYKLFGVSNIIKMMESVEPEQRRDCADSILTEANIWNNSPAGHGCLAYVQNLVSQVRSIELERDNVNRLLAFFRATRAHRHSVSDSQRPSGSESQPSEVVRMNEEHYRSESVHRFRQEGESSGVSKADDKGKKIAEEDETKKPPTDPFSSVKEPKKSNHMEKQRNSNFSRSYGFCHLLFVILSLLHEAFIVSLVCTLLRTKTVGYIAYHPNPKSRSTNRVCLLLDSGVELSRGGYIYIHGSAFAGAVSSSGMSNMDIGMGGTGNSRQPGESGDIQEASSSHKRKKSSKRHSEQQIQVLESFFKECPHPDKDQQRQLSRMVGLEQQQIKFWFQNKRTHTKALFERSSNDALRAENENINDENLGIKEVLKTLKCKSCAGSVFPENRVDQHILQSLQQENALLKQEHEKVCSLLSAYTGKPITELVALASALGSTLDLLSGISSNDHGNGNGSSSGLELNFGSSSGAAISGNNIVLDYCLRGITSKERAVMLETATSATKELVRLLDDDILWVKSQVDGRLVLRCDVYEEIFPNTNYHLKSSSAHLESSKDSRIVSMSAMQLVDMFLDSDKWVDLFPTIVTKAKTIEVLQIGLPENRDGALQLMYEQIHVLSPLVPPREFFFLRHCQQIKSGIWVIMDVSIDDLRENASRPRLWKLPSGCMIQETPNGTSMVTWVEHVEVDEKTQSHSLYRELLGSGIAFGAERWVVTLERMCERFEYSFRESIIASQEALGVISLPEGRRSIAKLANRMVKNFSEMLNMSGKQDCPEAKSSHGVQVSVCRNTEAGKPGGVIVSMATSLWLPLPYQAVFDFLKDETKRAQWDVLCDGKRPHEIARISNGVDPRNCTSIIQPFNLSEMNLLILQETCIDPLGCVLVYAPIDMTAINVAMCGRDSSKLPILASGFLIGPTSPNASPSLLTVAFQILISTSLSTKELNMELVAAVNALLCSTVHKIKLALNYSGLD 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00082 1007 CDD START_ArGLABRA2_like 532 758 - -
Bva14g00082 1007 ProSiteProfiles 'Homeobox' domain profile. 327 387 IPR001356 GO:0003677
Bva14g00082 1007 Pfam Homeodomain 332 385 IPR001356 GO:0003677
Bva14g00082 1007 SMART HOX_1 329 391 IPR001356 GO:0003677
Bva14g00082 1007 ProSiteProfiles START domain profile. 528 762 IPR002913 GO:0008289
Bva14g00082 1007 SUPERFAMILY Bet v1-like 779 987 - -
Bva14g00082 1007 SUPERFAMILY Homeodomain-like 312 385 IPR009057 -
Bva14g00082 1007 MobiDBLite consensus disorder prediction 126 210 - -
Bva14g00082 1007 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 324 1003 - -
Bva14g00082 1007 Pfam Lateral organ boundaries (LOB) domain 15 110 IPR004883 -
Bva14g00082 1007 Pfam START domain 579 759 IPR002913 GO:0008289
Bva14g00082 1007 SUPERFAMILY Bet v1-like 533 761 - -
Bva14g00082 1007 SMART START_1 536 759 IPR002913 GO:0008289
Bva14g00082 1007 MobiDBLite consensus disorder prediction 145 209 - -
Bva14g00082 1007 Coils Coil 437 457 - -
Bva14g00082 1007 ProSitePatterns 'Homeobox' domain signature. 362 385 IPR017970 GO:0000981|GO:0006355
Bva14g00082 1007 MobiDBLite consensus disorder prediction 303 336 - -
Bva14g00082 1007 Gene3D - 537 744 IPR023393 -
Bva14g00082 1007 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 324 1003 IPR042160 -
Bva14g00082 1007 Gene3D - 315 391 - -
Bva14g00082 1007 CDD homeodomain 338 385 IPR001356 GO:0003677
Bva14g00082 1007 MobiDBLite consensus disorder prediction 303 321 - -
Bva14g00082 1007 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00082 Bva-Chr14 434715 442903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00082 328 1001 Homeobox Transcription Factor Family AT1G73360 43.205 5.80e-180 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva14g00082 START 1e-34 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00082 K09338 - rcu:8266520 727.628