Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00065 ATGATGAGGCTGCAGACGTATGCTGGGCTTAGTTTGATTGCGACCCTTGCTGTTACGTATCATGCATTCAACAGTAGAGGCCAGTTTTATCCTGCAATGGTGTATCTCTCCACTTCCAAGATTAGTTTGGTGCTGCTTCTCAACATGGGACTGGTCATTATGTGTGTTTTATGGCAATTAACGAAAAAGGTATTCCTTGGTTCCCTGCGGGAAGCTGAGGTCGAGAGGCTTAATGAGCAATCCTGGAGAGAGGTTATGGAAATCCTCTTTGCAATTACTATATTTAGGCAGGACTTCTCTGTTACATTCCTTGCCATGGTCACTGCTCTTCTGTTGATTAAGGCTTTGCATTGGTTGGCTCAGAAGAGGGTCGAGTACATAGAAACAACTCCTACCGTCTCCACATTGTCTCATGTTCGAATTGTATCTTTTATGGGTGTCCTCCTCCTCCTTGATGGCCTCTTCTTATATAGCTCTATGAAGCATTTGATACAGACGTGGCAGGCTTCagtttctatcttttttgcttttgaGTACATGATTCTGGCAACAACAACAGTgtctatttttgtaaaataccTCTTCTATGTTAGCGACATGCTAATGGAGGGACAATGGGAAAGAAAACCAGTCTTCACGTTTTACCTCGAACTTATTCGGGACTTGCTCCACTTGTCTATGTATCTGTGCTTCTTTCTTGTAATCTTCATAAACTACGGTGTTCCTTTGCACTTAATACGGGAGCTCTATGAGACATTTAGGAACTTCAAAGTCCGTGTTGCTGATTACATGCGTTATCGTAAGATCACTTCAAATATGAATGATCGGTTTCCAGATGCAACCCCTGAAGAGCTTAATGCAAGTGATGCAACCTGCATTATCTGTCGTGAAGAGATGACTACTGCCAAGAAACTAATATGTGGGCATCTTTTCCATGTGCATTGCCTCCGATCATGGTTGGAGCGGCAACATACTTGCCCTACCTGCAGAGCTCTAGTTGTACCACCAGAAAATGGAACAACTGCTGCTGGAGGGCAGCATGGGCCACAGTCACATGCTAACCAGCAGGGAGCCGGCACTGGAAGCACAGGACAAGTTCCAGCAGGTAGTGGGGTAACAGGCGATAGTTTGAGTCAGCATCAAGCAAGACTTCAAACTGCTGCTGCAGCTGCTTCAATATATGAGAAGTCTTATGTTTACCCATCTGCATCTTCTTTAGTATGGTCCCCTGGATATGCTATTTATCCTTCAATTCAAAGACCTATGGGTGAATCTTCTAATACTGAGCTCAATGgagaacaaaataatgaacaaTCACAGAAACAGTTTGGTGGACCATCAAGCATGTCCTTTCCTCCAATGGGGAACTgtatctttcttccttcccaGACACGTGGAGCCAATTTGAATTATGGAGAAGGATTTGGAAATGATCCAAATATGCCAAGCTCTCATTTGGAAGCTCAAAGAAAACTTATTCAGTACCAGATTGAGATTCTGCAAAACCAGCTCCAGCTTCTGCAGAAGACAAAGGCTGAGGGAAGATCAGATGAGGGTACATCATTATCAGATAGCAAAGGGAAGAGCATTGCTTCCACTTCATCTGCGTCTAATATCGGTATTCATGAGGAGATTCAAGGTGGCAGTGCATA 1652 0.4207 MMRLQTYAGLSLIATLAVTYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCVLWQLTKKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVSTLSHVRIVSFMGVLLLLDGLFLYSSMKHLIQTWQASVSIFFAFEYMILATTTVSIFVKYLFYVSDMLMEGQWERKPVFTFYLELIRDLLHLSMYLCFFLVIFINYGVPLHLIRELYETFRNFKVRVADYMRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTAAGGQHGPQSHANQQGAGTGSTGQVPAGSGVTGDSLSQHQARLQTAAAAASIYEKSYVYPSASSLVWSPGYAIYPSIQRPMGESSNTELNGEQNNEQSQKQFGGPSSMSFPPMGNCIFLPSQTRGANLNYGEGFGNDPNMPSSHLEAQRKLIQYQIEILQNQLQLLQKTKAEGRSDEGTSLSDSKGKSIASTSSASNIGIHEEIQGGSA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00065 550 Pfam Ring finger domain 291 330 IPR001841 -
Bva14g00065 550 PANTHER RING ZINC FINGER PROTEIN 1 454 - -
Bva14g00065 550 MobiDBLite consensus disorder prediction 511 550 - -
Bva14g00065 550 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Bva14g00065 550 MobiDBLite consensus disorder prediction 343 379 - -
Bva14g00065 550 SMART ring_2 292 329 IPR001841 -
Bva14g00065 550 MobiDBLite consensus disorder prediction 423 448 - -
Bva14g00065 550 SUPERFAMILY RING/U-box 272 336 - -
Bva14g00065 550 MobiDBLite consensus disorder prediction 340 379 - -
Bva14g00065 550 CDD RING-H2_synoviolin 289 330 - -
Bva14g00065 550 Coils Coil 490 517 - -
Bva14g00065 550 MobiDBLite consensus disorder prediction 523 544 - -
Bva14g00065 550 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 337 IPR013083 -
Bva14g00065 550 PANTHER - 1 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00065 Bva-Chr14 336688 342142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00065 1 534 C3H Transcription Factor Family AT3G16090 65.047 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00065 K10601 - gmx:100816441 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00065 14 336688 342142 Bva14g00065 14 336688 342142 ECH