Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00058 ATGGATCCGTTTGATGATATCCTTCCAGGACCTCCAGTTGCACGTAGTCGAGCAGGTGGCAAGTTTATACCAAAGGCCAAATCAAAACAGCTGCCTCGCAAGGAAATATCTGCATCAGAACATATAGCCTCCTGCAATGATGGAACAAATGAGCATGTTGCGTTGTCCTCCGCCAGCACGAATACAATAAGACCTTCTCAGAATGAATatgATACCACAAGTCCCAAATTGGAGAATTTTCAACCGGTTAACGCGAACAGGGATGATGCAACCTTGGTGGATGCCCTACCTTCAACAATTGCAGTACCTGAAGTCAACCGTGCTTGGAATTCTACTGGTTTTCCAAAATCAGCAAGTGAGGAAAATTCTACAAGTTTTGATGCGGACTTGGGCACAAATACTATTCCTATGACCAACCTTAGAAATGAAAATGTATTGGGAAACGTTTCTGGTCCGTCTGCAACTAGCTCAAACTTTGTTGGGACTGAAGGGCCATTTAAAAATTGGGAAGGCTCATTATTTGATGGCAAAAATAATTTGGAACCTCCTGATACCTCATTACTAGTTAGCCTAGATGTTGCATCAAAAAAGGGTCCAGATCTTAAGGATGAAATGTTCGAGAGCAACATTCCTTCAAATTCTAGCCTTGGAGCAGCTGGAGAGGTAGAGCAAGTAGAATTTGAAGTTGATCCATTCAGCAATGTTCTCCCTGAATCTAGAGCTGGGAACGCTCGTAAGTTTCAACCCAAGATTAAGCCACGGCCTAAGATGGGCACAGTAGCAGCAGTTGCTTCTGATTCTCCTAATCTTGTGGTGGAAAAATCATTTGAGTTGCCTGCTTCTTGCACGAATGAGGTCCAGTCTTTTCAGTCTACTGACGGTGGCAGTGGTGGACTAACCAAGCCCACCAGTTCATCTTTACCTGTGTCAGAGATCCTTGGGACAACAGATCCTTCTAGTAATTTTGATTATACGAGTTCAAGTATCCCATTCTCAGATGACAACAGAAGATTAGGAGCAGTAAGTCCATGTCAACCAGATTCCTTGAACACTATGCTTCCACAAACTAGAGATTGGCcttctaattttgaaaaatcatctGGAGAGGTTGCAGATATATTTTCTGGTTTGGAATGCTTTGATGACTTTCTCGCTCAGTCTGCCATGGTTACAGaaaaatcagCTCTCCATGCTTTCAATGAGAAGGGCACAGAGGAAAATTTTGTCATTCCAACTTGTAGCCATACTACCACCCAAGACCCGTTAGCCTTCAAAGAAGCTGTTGCCTTCAATGAGGGTGGTACTGATGCTGATAATGGAAGGTCAGAAACAGAGTCTCAGGAAGTGTTGGCCTCAAATCCTGGCCGCCCAATTGATGATGTCCTTGATTATTCATCTATTAAATCTGGCCCAGATCCACCCTTTGAAATCCCGGAGCATGAAGGTCTGACAAATGCAGCAGCTGGTCCCACTTTGGGTGATCTTTTACTTGCAGAAGATATTCCTGGACCAAAAACCGATGCTGGTGATAAAGATAAAGGTGCCACAATGTCAACTGCTCCAAGGAAACATGAAAATTGTTCTACAGCTGAGAAGGATAATAACAATCGTAAAGCTTTGAGACAgacaagaaagagaacaatTCGTAAAGCTTCTGATGGGGCAGAGAGTGAAGCtgttgaagatgatgatgaccTTGACCCGCTTTATAATTGTAGTAGGGATGAACTTGAAGAAAATGACGATGAATGTGGAGCGGATCATTCGTCCAAGAATAAAAGAGCATCAACTAcatcaaagaagaaatctgTTACGAAAAGTAGAAAGCAATCTGGAAAGCATAAGGAGGCCAATGGGGATTTGGAAGAGTCTAGTAAAAAACCTCCCAAAAGGTTCTCTCATTCAACACGACGGAAAAAAAGATGTGtgGACAAGGCTTTGCTCGAAACTCCAGAAGACGAGCTAGACCCTCGAACATTGCCGATGAaggatattattttacttgcaGAATATAGGGAACGGCTAAAGAAAAAGGAGGCAGTAACATCACAAACAGCTTCCATCAATCAAAGtggTAGAGATTCCTTTCATGATGCTGCTACTAATGATGAAGAGGAGGATTTTGGTTCAGAGGATGGAAGAGCTTCAGACGATGATCAAGCCATTGAAAGGGTTTCATCAGCTTCCACTTTAATCAATTACAGATCATTCATGGACAAGACACCAAGTGGAAAATGGTCAAAACAAGACACTGAACTGTTTTATCAgGCTGTCCGGGAGTTTGGCACAGATTTTTCAATGATACAACAGCTTTTCCCTGGTCGAACACGTCATCAAGTTAAGCTGAAGTACAAGAAGGAAGAGCGCCAACATCCTTTGCGTCTGTCTGAAGCTATGAATAATCGTGCAAAAGAGCGcactcattttaaaattttgattgagcGACTGCAACAAGCTTCCACTAGGGCAGAACAAGAGCCTGCTTCCAGTAGAGAAGAAGATCCCGTAACGGATGCCTCAGTTGGAATAACAGGAGAGGAGGCGGGGGACATGATGCCTGAAACTAATGATGAGGGGGCAAAACCCGAGCCGGAAGCAACTGTCAAAGATCAGGATGATTCTGTGCCATTGCGTAGTCCAGAGAAGAAATCTGATGAAAGTGAAGATGATGACTACTACAGATGGAGTCAATACAAGagtgattatta 2708 0.4125 MDPFDDILPGPPVARSRAGGKFIPKAKSKQLPRKEISASEHIASCNDGTNEHVALSSASTNTIRPSQNEYDTTSPKLENFQPVNANRDDATLVDALPSTIAVPEVNRAWNSTGFPKSASEENSTSFDADLGTNTIPMTNLRNENVLGNVSGPSATSSNFVGTEGPFKNWEGSLFDGKNNLEPPDTSLLVSLDVASKKGPDLKDEMFESNIPSNSSLGAAGEVEQVEFEVDPFSNVLPESRAGNARKFQPKIKPRPKMGTVAAVASDSPNLVVEKSFELPASCTNEVQSFQSTDGGSGGLTKPTSSSLPVSEILGTTDPSSNFDYTSSSIPFSDDNRRLGAVSPCQPDSLNTMLPQTRDWPSNFEKSSGEVADIFSGLECFDDFLAQSAMVTEKSALHAFNEKGTEENFVIPTCSHTTTQDPLAFKEAVAFNEGGTDADNGRSETESQEVLASNPGRPIDDVLDYSSIKSGPDPPFEIPEHEGLTNAAAGPTLGDLLLAEDIPGPKTDAGDKDKGATMSTAPRKHENCSTAEKDNNNRKALRQTRKRTIRKASDGAESEAVEDDDDLDPLYNCSRDELEENDDECGADHSSKNKRASTTSKKKSVTKSRKQSGKHKEANGDLEESSKKPPKRFSHSTRRKKRCVDKALLETPEDELDPRTLPMKDIILLAEYRERLKKKEAVTSQTASINQSGRDSFHDAATNDEEEDFGSEDGRASDDDQAIERVSSASTLINYRSFMDKTPSGKWSKQDTELFYQAVREFGTDFSMIQQLFPGRTRHQVKLKYKKEERQHPLRLSEAMNNRAKERTHFKILIERLQQASTRAEQEPASSREEDPVTDASVGITGEEAGDMMPETNDEGAKPEPEATVKDQDDSVPLRSPEKKSDESEDDDYYRWSQYKSDY 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00058 902 PANTHER TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG 245 886 - -
Bva14g00058 902 CDD SANT 745 786 IPR001005 -
Bva14g00058 902 Gene3D - 746 810 - -
Bva14g00058 902 MobiDBLite consensus disorder prediction 681 696 - -
Bva14g00058 902 MobiDBLite consensus disorder prediction 610 630 - -
Bva14g00058 902 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 245 886 - -
Bva14g00058 902 MobiDBLite consensus disorder prediction 504 556 - -
Bva14g00058 902 MobiDBLite consensus disorder prediction 678 722 - -
Bva14g00058 902 MobiDBLite consensus disorder prediction 642 657 - -
Bva14g00058 902 ProSiteProfiles SANT domain profile. 741 789 IPR017884 -
Bva14g00058 902 MobiDBLite consensus disorder prediction 290 311 - -
Bva14g00058 902 Pfam Myb DNA-binding like 736 818 IPR039467 -
Bva14g00058 902 SUPERFAMILY Homeodomain-like 744 792 IPR009057 -
Bva14g00058 902 MobiDBLite consensus disorder prediction 432 657 - -
Bva14g00058 902 MobiDBLite consensus disorder prediction 854 902 - -
Bva14g00058 902 MobiDBLite consensus disorder prediction 817 902 - -
Bva14g00058 902 SMART sant 742 790 IPR001005 -
Bva14g00058 902 MobiDBLite consensus disorder prediction 56 76 - -
Bva14g00058 902 MobiDBLite consensus disorder prediction 1 34 - -
Bva14g00058 902 MobiDBLite consensus disorder prediction 595 609 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva14g00058 Myb_DNA-bind_7 9.2e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00058 K15198 - gmx:100792788 749.199