Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00053 ATGATAACTGTAGCTCCTTCTCTTGATACCCAGAGCCCAGATTTCTCTTCTCCTAAAAATGCTCCTGAACAAAACCCATCTCCCAAAAATATCCATATCTTCAAATCCAAATTACCCGATATACCCATCTCCAACCACCTTCCCCTTCACACCTACTGTTTCGAGCACCTGTCTCAAACTAGTGATCGCCCGTGTCTCATCGTCGGCTCCACCGGCAGAATCTACACCTACGCCGAGACCCACCTCCTTTCCCGGAAGATCGCAGCCGGTTTGGCCAATCTCGGTATCAAGAAAGGCGACGTCATTATGATTCTCCTCCAGAATTGCGCCGAGTTCGTCCTCTCCTTCGTGGCAGCCTCCATGATCGGGGCCGTCGTCACCACTGCCAACCCATTTTACACCTCCGCCGAAATCTATAAGCAGTTTGAAGCCTCCAAATCTAAATTGATCATCACTCAGTCCATTTACGTCGACAAGCTCCGAGACAACCAAGACAAGCACCCCAAAATCGGCGACGATTTTAAGGTAATCACGATCGACGATCCACCGGAAAATTGTTTGCATTTCTCGGTGATTTCCGAGGCCGATGAGAGTGAACTGCCAGAGGTTGAAATCGACCCAAATGACCCGGTTGCGCTACCCTTCTCTTCAGGTACCACCGGGTTACCCAAAGGGGTGATCCTTACCCATAAGAGCTTAACGACCAGTGTGGCACAACAAGTGGACGGAGAGAATCCCAACCTGTATCTGACGCACGACGACGTTTTGCTCTGTGTGCTTCCGCTGTTCCACATATTCTCGTTGAACAGCGTGCTGTTATGCGCGCTGAGAGCGGGGAGTGCGGTGTTGTTGATGCCGAAATTTGAGATAGGTGCACTGTTGGAATTGATACAGCAACACAAAGTCTCGGTGGCGATGGTGGTGCCGCCGCTGGTGCTGGCTTTGGCGAAGAATCCGATGGTGGCGGATTTTGATCTGAGCTCGATTCGGTTGGTGCTGTCAGGGGCTGCGCCGCTGGGGAAGGAGCTGGAGGACGCTCTAAGGAGCAGAGTGCCTCAGGCAATTTTGGGACAGGGGTACGGAATGACAGAGGCGGGACCAGTGCTATCAATGTGCTTAGGATTTGCGAAGCAAGCATTCCCAACAAAGGCAGGTTCATGTGGAACTGTGGTTAGAAATGCAGAGCTCAAGGTCGTTGACCCTGACACAGGTTCCTCTCTTGGCTATAATGGAGCCGGTGAAATTTGCATAAGAGGCCATCAGATCATGAAAGGCTATCTCAATGATCACAACGCCACTGCGGCAACCATCGATGCCGACGGTTGGCTTCATACCGGTGATATTGGCTATGTAGATGAGGATGATGAGATTTTCATTGTTGACAGAGTCAAGGAACTCATCAAATTTAAAGGCTTCCAGGTTCCGCCAGCAGAACTCGAAGGCCTTCTTATAAGCCACCCGTCCATTGCAGACGCTGCCGTCGTACCGCAAAAGGATCCTGTTGCCGGCGAAGTTCCTGTGGCTTTCGTGGTCAGATCAAATGGTTTTGATCTTACGGAGGAGGCTGTCAAGGAATTTATAGCTAAACAGGTAGTATTCTACAAGAGAATACACAAAGTTTACTTTGTTCATGCTATCCCAAAGTCTCCATCAGGCAAGATATTGAGGAAAGATCTCAGAGCAAAGctagcagcagcagcagcttcCAACGACACCTCgtctta 1724 0.4936 MITVAPSLDTQSPDFSSPKNAPEQNPSPKNIHIFKSKLPDIPISNHLPLHTYCFEHLSQTSDRPCLIVGSTGRIYTYAETHLLSRKIAAGLANLGIKKGDVIMILLQNCAEFVLSFVAASMIGAVVTTANPFYTSAEIYKQFEASKSKLIITQSIYVDKLRDNQDKHPKIGDDFKVITIDDPPENCLHFSVISEADESELPEVEIDPNDPVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTHDDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMPKFEIGALLELIQQHKVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQAFPTKAGSCGTVVRNAELKVVDPDTGSSLGYNGAGEICIRGHQIMKGYLNDHNATAATIDADGWLHTGDIGYVDEDDEIFIVDRVKELIKFKGFQVPPAELEGLLISHPSIADAAVVPQKDPVAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRIHKVYFVHAIPKSPSGKILRKDLRAKLAAAAASNDTSS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00053 574 Pfam AMP-binding enzyme C-terminal domain 478 553 IPR025110 -
Bva14g00053 574 PANTHER 4-COUMARATE--COA LIGASE 3 32 562 - -
Bva14g00053 574 Gene3D - 464 567 IPR045851 -
Bva14g00053 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 32 562 - -
Bva14g00053 574 ProSitePatterns Putative AMP-binding domain signature. 213 224 IPR020845 -
Bva14g00053 574 CDD 4CL 43 559 - -
Bva14g00053 574 Pfam AMP-binding enzyme 55 469 IPR000873 -
Bva14g00053 574 SUPERFAMILY Acetyl-CoA synthetase-like 45 565 - -
Bva14g00053 574 MobiDBLite consensus disorder prediction 1 29 - -
Bva14g00053 574 Gene3D - 25 463 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00053 Bva-Chr14 276537 279357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00053 22 476 Monolignol Biosynthesis Gene Families AT1G65060 71.179 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00053 K01904 - gmx:547492 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00053 14 276537 279357 Bva14g00053 14 276537 279357 ECH