Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00043 ATGGACGGCCTTTACAGTGGAGCAACGGTGGCCAATCCAGGGGTGGCGGCGGTGAATGGGAATTCTGTGCCGCCATTCTTGAGCAAGACCTATGACATGGTGGACGACCCGTCTACCAACTCGGTTGTATCGTGGAGTGATAACAACAACAGCTTCATCGTTTGGAGTGTGCCCGAACTCGCCAGGGATATCTTGCCTAAGTATTTTAAGCATAACAACTTCTCCAGCTTCGTCAGGCAATTGAACACTTACGGGTTTAGAAAGGTAGACCCAGACCGCTGGGAATTTGCAAATGAAGGATTTTTGAGGGGCcaaaaacaacttttaaagAATATCAATCGGAGGAAAGCTCATGTAACTGGTAATCAACAAGTACCTCCGGTGCAGAACTCACCTGTTGGTGCTTGCGTTGAAGTGGGGAAGTTTGGGCTTGAGGAAGAGGTTGAAAGACTGAAAAGGGATAAGAATGTTCTTATGCAGGAACTCGTTAGGTTGAGACAGCAACAGCAAACAACTGATAACCAATTGCAAAGTGTTGGGCAACGCGTGCAGGTAATGGAGCAGCGTCAGCAACAAATGATGTCATTCTTGGCTAAGGCTATGCAGAGTCCAAGCTTCTTGGCTCAGTTTGTACAGCAGCAAAATGAAAGCAACAGACATATCAACGGAGGCAATAAAAAGAGGCGACTTGCCCAGCAGGATGAAGATAACTTAGCCACTGAACATGTCCATAATGCTCTTGATGGACGTGTTGTCAAGTACCAGCCTTCCATGAATGAGGCAGCAAAAGCATTATTACGCCAGATATTGCAAATTAACACTTCTGCTAGGATGGAGTCAGCAATGAAGAACGCTGATGCATTCCTTATTGATGATGTTCCTTCTGCCATAGCGTTAGATAGCAGGAGTTCCTCCAGTCGAATTTCTGGAGTGACCCTTGCAGAGGTTCCTGTTCCACCTACTTCTGGGCAGTCTTACACGGCCGTAGAATCAGAATTTCCAGTCAATTGTATGCTTAATGGCATATCCAAGATGCAGTCTTCTAGTGCTGTCTTGACTGACTGTATTAAAGCAGCTGAGTTTCCAGAATTGGATCTGCATAATAGCCAAGATGCAGTCTTGGATTTTGGTAAAGTTCAAGGGGTGGAGACAGAAAGCAGTTTAGTGGAACCTGATCTAAATTTTCTGGGGCCTGACACAGGGGATATAGCGGATTTAGATATGATGTCAGCAGTTTTGGATGGGACAAGTTCTGTAGAAGCTGATGCTTATTCACCCAATCCGGATGTAATTGCTAAGCTCCCAGGTATTAATGATGCATTCTGGGAACAGTTTCTCACAGCAAGCTCACTAACTGGAGATACAGATGAAACTGATTCTAGCTCTCCAGTCGATGGTTTGACTAAAGATCAGGAATTTGCATCGGAAATGGAGAATGGACAGGAAAAGATGGATAAGAGACATCATATTGACCATCTTACTCAACAGATGGGATTACTTGCATCAGAATCTTCTta 1517 0.445 MDGLYSGATVANPGVAAVNGNSVPPFLSKTYDMVDDPSTNSVVSWSDNNNSFIVWSVPELARDILPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQLLKNINRRKAHVTGNQQVPPVQNSPVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNQLQSVGQRVQVMEQRQQQMMSFLAKAMQSPSFLAQFVQQQNESNRHINGGNKKRRLAQQDEDNLATEHVHNALDGRVVKYQPSMNEAAKALLRQILQINTSARMESAMKNADAFLIDDVPSAIALDSRSSSSRISGVTLAEVPVPPTSGQSYTAVESEFPVNCMLNGISKMQSSSAVLTDCIKAAEFPELDLHNSQDAVLDFGKVQGVETESSLVEPDLNFLGPDTGDIADLDMMSAVLDGTSSVEADAYSPNPDVIAKLPGINDAFWEQFLTASSLTGDTDETDSSSPVDGLTKDQEFASEMENGQEKMDKRHHIDHLTQQMGLLASESS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00043 505 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE 12 486 - -
Bva14g00043 505 Coils Coil 141 168 - -
Bva14g00043 505 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva14g00043 505 Gene3D - 18 116 IPR036388 -
Bva14g00043 505 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva14g00043 505 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva14g00043 505 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva14g00043 505 SUPERFAMILY "Winged helix" DNA-binding domain 21 115 IPR036390 -
Bva14g00043 505 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva14g00043 505 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva14g00043 505 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 486 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00043 Bva-Chr14 231532 235426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00043 21 504 HSF AT5G16820 53.400 9.14e-155 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva14g00043 HSF_DNA-bind 3e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00043 K09419 - pvy:116134854 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00043 14 231532 235426 Bva14g00043 14 231532 235426 ECH